# #设置,包括= FALSE ----------------------------------------------------- knitr: opts_chunk美元集(echo = TRUE,消息= FALSE,警告= TRUE ) ## ----------------------------------------------------------------------------- 库(TreeSummarizedExperiment) set.seed(1) #谢霆锋:没有列树(tse_a < makeTSE(包括。colTree = FALSE) #结合两个tse(由行(tse_aa < - rbind tse_a tse_a )) ## ----------------------------------------------------------------------------- 相同的(rowTree (tse_aa) rowTree (tse_a )) ## ----------------------------------------------------------------------------- set.seed (2) tse_b < - makeTSE(包括。colTree = FALSE) #不同的行树相同(rowTree(tse_a)， rowTree(tse_b)) # 2 rowTree(tse_ab <- rbind(tse_a，tse_b )) ## ----------------------------------------------------------------------------- rowLinks tse_aa rowLinks (tse_ab ) ## ----------------------------------------------------------------------------- rowTreeNames (tse_aa) rowTreeNames (tse_ab) #原来的树的名字输入tse rowTreeNames tse_a rowTreeNames (tse_b ) ## ----------------------------------------------------------------------------- rowTreeNames (tse_ab) < - paste0(“树”,rowLinks (tse_ab 1:2) ) ## ----------------------------------------------------------------------------- cbind (tse_a tse_a) cbind (tse_a tse_b ) ## ----------------------------------------------------------------------------- ( 上交所< - tse_ab [11:15,] rowLinks (sse) ) ## ----------------------------------------------------------------------------- set.seed (3) tse_c < - makeTSE(包括。colTree = FALSE) rowTreeNames (tse_c) < - - - - - -“new_tree”# tse_c的前两行,并映射到“new_tree”sse (1:2,) < - tse_c [5:6,] rowLinks (sse ) ## ----------------------------------------------------------------------------- # 通过树sse_a < - subsetByNode (x = sse, whichRowTree =“new_tree”)rowLinks (sse_a) #节点sse_b < - subsetByNode (x = sse rowNode = 5) rowLinks (sse_b) #树和节点sse_c < subsetByNode (x = sse, rowNode = 5,rowLinks (sse_c whichRowTree = " tree2 ") ) ## ----------------------------------------------------------------------------- colTree (sse)库(猿)set.seed (1) col_tree <——rtree (ncol (sse) #使用‘colTree setter,输入树节点标签应该匹配#谢霆锋的列名。col_tree美元小费。标签< - colnames (sse) colTree (sse) < - col_tree colTree (sse ) ## ----------------------------------------------------------------------------- # 原行链接rowLinks (sse) #新行树set.seed (1) row_tree < - rtree (4) row_tree美元小费。标签< - paste0(“实体”,前书5章7节)#取代树命名为‘new_tree了无< - sse rowTree(了无whichTree =“new_tree”)< - row_tree rowLinks(了无 ) ## ----------------------------------------------------------------------------- # 假预计相同(rowTree (sse whichTree =“new_tree”),rowTree(了无,whichTree =“new_tree”))#真正的预计相同(rowTree(了无,whichTree =“new_tree”),row_tree ) ## ----------------------------------------------------------------------------- sessionInfo ()