twoddpcr v1.5.1(猛击发布日期:2018-05-21)= = = = = = = = = = = =更新联系人维护者的细节。twoddpcr v1.3.1(猛击发布日期:2018-01-10)= = = = = = = = = = = = Bug修复:*修复问题# 2:现在“plotLimits”参数是用于“facetPlot”功能在使用“cMethod”参数。twoddpcr v1.1.3(猛击发布日期:2017-07-31)= = = = = = = = = = = =新特性:* facetPlot单元测试。twoddpcr也(猛击发布日期:2017-07-28)= = = = = = = = = = = =新特性:* facetPlot现在有一个新的“cMethod”参数绘图的分类。twoddpcr v1.1.1(猛击发布日期:2017-07-17)= = = = = = = = = = = = Bug修复:*合并所有下面的Bug修复。twoddpcr v1.0.6(发布日期:2017-06-08)= = = = = = = = = = = = Bug修复:* # 1进一步解决问题:捕获所有错误从上传滴振幅csv。twoddpcr v1.0.5(发布日期:2017-06-01)= = = = = = = = = = = = Bug修复:* # 1进一步解决问题:阻止闪亮的应用程序崩溃当一个通道数据或数据错误的格式上传。强调在只有两个通道数据被接受。*让所有超链接打开一个新标签/页面。这可以防止用户意外结束会话的应用,twoddpcr v1.0.4(发布日期:2017-05-30)= = = = = = = = = = = = Bug修复:*修复问题# 1:加载QuantaSoft分类不再寻找名为“集群”一列。 twoddpcr v1.0.3 (Release date: 2017-05-26) ============ Bug fixes: * Ensure that the Rmd template is copied for report generation in the Shiny app. twoddpcr v1.0.2 (Release date: 2017-05-05) ============ Documentation: * Update the citation information for the Bioinformatics paper. twoddpcr v1.0.1 (Release date: 2017-05-04) ============ Documentation: * In the Shiny app, add a reference to the Bioconductor vignette comparing the classification methods. Bug fixes: * Minor fix removing conflicts in the dropletPlot documentation. twoddpcr v1.0.0 (Release date: 2017-04-25) ============ First full release incorporating all of the devel updates. twoddpcr v0.99.2 (Release date: 2017-03-21) ============ Updates as suggested by anonymous reviewers. Shiny app: * Simple dynamic HTML report generation. * Re-use the user-specified labels in plots and tables (where possible). NN, NP, PN and PP are still used internally and for file input/output. * Add captions to pages, improve the help sidebars and page. Vignette: * Describe the KRASdata dataset. * Compare the classification methods with discussion. Bug fixes: * k-means failed when only one class was present. twoddpcr v0.99.1 (Release date: 2017-02-16) ============ More R-like changes as suggested by Martin Morgan at Bioconductor. Main changes: * ddpcrPlate objects can be subsetted like a list * The amplitudes() function replaces getDroplets() and getAllDroplets() * wellClassification() and plateClassification() replace the old get/set methods and can be set using <- * Changes to improve the robustness and clarity of the code twoddpcr v0.99.0 (Release date: 2017-01-24) ============ First devel release. twoddpcr is an R package for Droplet Digitial PCR (ddPCR) analysis. The name of the package reflects the package's support for analysing two channel ddPCR data. Key functionality: * Create ddpcrPlate objects * kmeansClassify() classifies droplets using k-means clustering * mahalanobisRain() refines the classification, removing ambiguous droplets