1.5.6 o版本变化数据被更新以匹配所有数据从STRINGdb发布11。1.5.1版本变化变化对阿differentiallyExpressed()方法返回:现在包含原始的假定值输出。o变化对clusterEnrichment()方法返回:现在包含原始的假定值输出。阿一段称为“常见问题”中添加了装饰图案。版本变化1.3.6 o槽genesInTerm添加到Transcriptogram类。o参数从differentiallyExpressed boundaryConditions():默认从假的变成真的。o参数从clusterVisualization onlyGenesInDE():默认从真的变成假的。o参数从clusterEnrichment onlyGenesInDE():默认从真的变成假的。o参数颜色添加到differentiallyExpressed()方法。o参数颜色添加到clusterVisualization()方法。 o Argument colors added to the enrichmentPlot() method. o Argument alpha added to the enrichmentPlot() method. Changes in version 1.3.4 o Argument universe from clusterEnrichment(): default changed from "all the proteins present in the transcriptogramS2 slot" to "all the proteins present in the ordering slot". Changes in version 1.3.3 o Change on the clusterEnrichment() method return. o Slots Protein2GO, and Terms added to the Transcriptogram class. o New methods: enrichmentPlot() and Terms(). Changes in version 1.3.1 o Argument boundaryConditions added to the differentiallyExpressed() method. o Slots Protein2Symbol, clusters, and pbc added to the Transcriptogram class. o Argument onlyGenesInDE added to the clusterVisualization() method. o Argument onlyGenesInDE added to the clusterEnrichment() method. Changes in version 1.1.18 o The differentiallyExpressed() method plot now uses the ggplot2 package and shows the number of clusters detected. Changes in version 1.1.11 o Argument title added to the differentiallyExpressed() method. Changes in version 1.1.7 o Argument trend added to the differentiallyExpressed() method to support limma-trend. Changes in version 1.1.6 o GPL570 dataset updated. Changes in version 1.1.3 o All species datasets (Homo sapiens, Mus musculus, Saccharomyces cerevisiae and Rattus norvegicus) were updated to obtain a better clustering. Changes in version 1.0.0 o Released at Bioconductor [2017-10-31].