1.9.3版更改-对vignette的轻微拼写和布局修复,- @PeteHaitch更正了vignette中的表布局,- 1.9.2版更改-轻微文档修复1.9.1版更改- Spencer Nystrom对join_nearest函数家族做出了几个重要贡献:Join_nearest_ (x, y,…, distance = TRUE)函数族现在接受一个新的参数distance,它允许用户添加一列,表示最近的范围y到x的距离。add_nearest_distance_(x, y,…)函数族,它将向x ranges对象添加一个新的元数据列,该对象包含到y中最近邻居的距离。如果没有最近邻居,新列将被赋予一个缺失的值。1.7.16版的变化-重构选定的内部组件,改进速度当铸造一个农庄——> DataFrame变化版本1.7.15 -进一步修复减少/分离内部变化版本1.7.14 -修复减少/分离内部清理分离情况下发生膨胀的变化版本1.7.13 - tidyselect版本设置为v 1.0 -设置授权范围覆盖方法解决文档bam阅读版本1.7.11变化——从tidyselect:: vars_select tidyselect ():: eval_select()的变化版本1.7.7 -更新处理对于列表列,如果列表是并行的,expand_ranges()不再取笛卡尔积。summary()正确地处理列表列输出,而不会破坏列的数量。1.7.5版的更改-修复了range构造的62号问题,as_granges()和as_iranges()函数现在正确处理List列-添加了帮助函数来处理range中的名称。看到了吗?详细信息是range -names。 Changes in version 1.7.4 - added slice() for Ranges, and GroupedRanges - internals of grouping have been overhauled, but there shouldn't be any user facing changes. It is now much faster to generate groupings. - group information can be interrogated with dplyr::group_keys() - a GRangesList can be obtained automatically from a GroupedGenomicRanges with dplyr::group_split() - group indices can be generated with dplyr::group_indices() Changes in version 1.7.3 - shift_downstream() and shift_upstream() now properly handle vector amounts of shift. Fixes issue #73 Changes in version 1.7.2 - Left outer join overlap operations now work if either x or y have no metadata columns see #70 - Left outer join overlap operations will also correctly behave in situations when there are no non-overlapping ranges. - Left outer join overlaps no longer modify seqinfo (see here)[https://support.bioconductor.org/p/125623/] - patch left outer join when x or y are IRanges, flesh out overlaps documentation. Changes in version 1.7.1 - Reformatting NEWS.md so no longer softlinks to inst/NEWS Changes in version 1.5.13 - plyranges release and devel have removed unnest() and replaced it with expand_ranges() due to changes in the tidyr API. Please replace all uses of this function with expand_ranges() Changes in version 1.3.4 - fixed bind_ranges so it preserves rownames Changes in version 1.1.5 - enable right generics to be called upon invoking plyranges functions without loading plyranges Changes in version 1.1.4 - added tile/window methods - fixed up documentation Changes in version 1.1.3 - doc updates Changes in version 1.1.2 - speed up of group_by methods - refactor of BAM reading utilities Changes in version 0.99.10 - refactored set_width out so it's called internally by mutate - along with set_width there are other internal set_ methods - add _within_directed variants for overlaps methods - modified overscope_ranges to be an S3 method, should enable more refactoring in the future Changes in version 0.99.9 //www.anjoumacpherson.com/packages/devel/bioc/html/plyranges.html - package passed review and is now on Bioconductor devel branch! - I've been pretty slack with updating the NEWS file but will be more diligent in the future.