提高搜索tfbp的速度。在1.3.3中添加了reverseccomplementary，用于保守的motifs搜索。在1.3.2中修改，增加了对多重对齐功能的支持。o添加对HTML输出对齐的支持。增加了对getENCODEdata直接导入GRanges的支持。#在1.1.1 o改变修复警告枚举值没有处理在开关[-Wswitch] #改变在0.99.17 o尝试获得更多的错误信息从BioC构建。在0.99.16修改了错误的主题压水机。修正了错误的主题压水机。#改变在0.99.14 o修复一个错别字在小插图。在0.99.13中添加了函数searchTFBPS。 # Change in 0.99.12 o Update the documentation. o Add motifConsensus argument for saveAlignments function. # Change in 0.99.11 o Fix typos in documentation. # Change in 0.99.10 o Add Makevars.win file to clean .o files in src. # Change in 0.99.9 o fix the make error: 'logf' was not declared in this scope. # Change in 0.99.8 o Change sprintf to snprintf for Muscle/typetostr.cpp:14:22. # Change in 0.99.7 o Remove functions contain fgets. # Change in 0.99.6 o Update the sample data al. # Change in 0.99.5 o Remove the so file from src folder. # Change in 0.99.4 o Remove the dependence of msa. # Change in 0.99.2 o Fix the issues listed in [#2181](https://github.com/Bioconductor/Contributions/issues/2181) # Change in 0.99.1 o fix the mis-link of genome in examples of alignment. # Change in 0.99.0 o Update the DESCRIPTION. o Update documentation of enhancers and saveAlignments # Change in 0.1.2 o drop ENCODExplorer.