1.56版本的变化----------------------- goSlim()的显著用户可见的变化不会截断Terms (https://github.com/Bioconductor/GSEABase/issues/5) 1.54版本的变化-----------------------组织数据库的显著用户可见的变化不再提供统一的信息。删除的支持。1.39版更改-----------------------修复了goSlim()不能正确计数重复标识符的BUG。(https://support.bioconductor.org/p/100403/) 1.35版本的更改-----------------------修复了一些多行警告和错误将在不报告错误消息的情况下失败的错误。get tgmt ()， GO GeneSetCollection方法快得多。在1.31版本的变化-----------------------重要的用户可见的变化，以支持'h'广泛设置的BUG修复0。“graphNEL”)未能包括多个子更改在1.23版本-----------------------重要的用户可见的变化支持'c7'广泛设置警告或删除重复的geneid时，解析GMT或广泛的XML在1.21版本的变化-----------------------重要的用户可见的变化GeneSetCollection，*，*，GOCollection-method尊重证据代码和本体在1.19版本的变化-----------------------新功能添加uniprodentifier类在1.13版本的变化----------------------- 阿新特性解析子类别广泛的基因集。重要的用户可见的变化o一个特殊的标识符取代了基于ruid的标识符。1.5版本的变化----------------------对EntrezIdentifier，酶标识符，GenenameIdentifier, RefseqIdentifier, SymbolIdentifier, UnigeneIdentifier类的构造函数的重大用户可见的变化现在可以接受一个'annotation'参数。 This is used to indicate which annotation package the identifiers are from, e.g., EntrezIdentifier("hgu95av2.db") indicates that the EntrezId's are from the hgu95av2.db package. o GOCollection now tracks ontology as well as evidenceCode. o Add ComputedCollection class to describe gene set collections resulting from computations. o Additional GeneSetCollection constructors o Add OBOCollection class for reading OBO gene sets, including functions to retrieve OBO collections from the internet (getOBOCollectoin) and convert OBOCollections to and from graphNEL objects. o GeneSets constructed from GOCollections require a geneIdType with an appropriate (i.e., GO to identifier) mapping, e.g., geneIdType=EntrezIdentifier("org.Hs.eg.db") NEW FEATURES o geneIdType<- and mapIdentifiers can now map between any two identifier types within an annotation package, e.g., SymbolIdentifer('org.Hs.eg.db') to GenenameIdentifier('org.Hs.eg.db') o Parse revised Broad gene sets. o More extensive information in some 'show' methods o Added a mapIdentifiers method to allow maps with user-supplied AnnDbBimap objects BUG FIXES o GO evidenceCodes updated to current codes available as defined in GO o GeneSetCollection,ExpressionSet,(Pfam|Prosite|Chrloc)Collection-method now correctly navigate the underlying annotations and create gene set collections o A GeneSetCollection constructed with a named list could incorrectly propagate the set names. o Export MapCollection class o Mapping AnnotationIdentifer to AnnotationIdentifier failed due to incorrect method selection (start date: 9 February, 2008)