注释

doi:10.18129/b9.bioc.annotate

微阵列的注释

生物导体版本:版本(3.12)

使用R环境进行注释。

作者:R。绅士

维护者:bioconductor.org>的生物导体套件维护器<维护器>

引用(从r内,输入引用(“注释”)):

安装

要安装此软件包,请启动R(版本“ 4.0”)并输入:

if(!sireseenamespace(“ biocmanager”,悄悄= true))install.packages(“ biocmanager”)biocmanager :: install(“ Annotate”)

对于R的较旧版本,请参考适当的生物导体释放

文档

要查看系统中安装此软件包的版本的文档,请启动R并输入:

browsevignettes(“注释”)

PDF R脚本 注释概述
PDF R脚本 基本使用
PDF R脚本 HOWTO:获取HTML输出
PDF R脚本 Howto:使用染色体信息
PDF R脚本 Howto:使用在线查询工具
PDF R脚本 使用Affymetrix探针级别数据
PDF R脚本 使用数据软件包
PDF R脚本 使用同源包
PDF 参考手册
文本 消息

细节

生物浏览 bob 体育平台下载 ,,,,bob 体育平台下载 ,,,,bob 体育平台下载 ,,,,bob 体育平台下载
版本 1.68.0
在生物导体中 Bioc 1.6(R-2.1)或更早(> 15.5岁)
执照 艺术2.0
要看 r(> = 2.10),AnnotationDbi(> = 1.27.5),XML
进口 生物酶,,,,DBI,,,,Xtable,图形,utils,统计,方法,生物基因(> = 0.13.8),httr
链接
建议 HGU95AV2.DB,,,,GeneFilter,,,,生物弦(> = 2.25.10),iranges,,,,rae230a.db,,,,Rae230 aprobe,,,,tkwidgets,,,,go.db,,,,org.hs.eg.db,,,,org.mm.eg.db,,,,hom.hs.inp.db,,,,Hunanchrloc,,,,rgraphviz,,,,运行
系统要求
增强
URL
取决于我 ChromheatMap,,,,Geneanswers,,,,Geneplotter,,,,戈西姆,,,,gseabase,,,,惯用图,,,,MACAT,,,,MGFM,,,,米尼卡,,,,mlinterfaces,,,,Neve2006,,,,PCPHENO,,,,,,,,preda,,,,predasampledata,,,,rpsixml,,,,采样分类剂,,,,Scisi,,,,精灵
进口我 咖啡店,,,,类别,,,,类别Compare,,,,CNER,,,,codelink,,,,碎片器,,,,drugvsdisease,,,,Geneanswers,,,,GeneFilter,,,,Globalancova,,,,全球测试,,,,gostats,,,,Lumi,,,,甲基分析,,,,甲基菌,,,,mgfr,,,,途径图,,,,,,,,qpgraph,,,,报告工具,,,,Scisi,,,,Systempiper,,,,蒂格,,,,umi4cats
建议我 Adme16cod.db,,,,ag.db,,,,ATH1121501.DB,,,,生物探测,,,,生物基因,,,,Biomart,,,,Bovine.db,,,,,,,,canine2.db,,,,celegans.db,,,,Chicken.db,,,,clariomdhumanprobeset.db,,,,clariomdhumantranscriptcluster.db,,,,clariomshumanhttranscriptcluster.db,,,,clariomshumantranscriptcluster.db,,,,clariomsmousehttranscriptcluster.db,,,,clariomsMousEtranscriptcluster.db,,,,clariomsrathttranscriptcluster.db,,,,clariomsrattranscriptcluster.db,,,,drosgenome1.db,,,,果蝇2.DB,,,,ecoli2.db,,,,基因组机,,,,gghhumanmethcancerpanelv1.db,,,,GSAR,,,,gsealm,,,,H10KCOD.DB,,,,H20KCOD.DB,,,,HCG110.DB,,,,hgfocus.db,,,,HGU133A.DB,,,,HGU133A2.DB,,,,HGU133B.DB,,,,hgu133plus2.db,,,,HGU219.DB,,,,HGU95A.DB,,,,HGU95AV2.DB,,,,HGU95B.DB,,,,HGU95C.DB,,,,HGU95D.DB,,,,hgu95e.db,,,,hguatlas13k.db,,,,hgubeta7.db,,,,hgudkfz31.db,,,,hgug4100a.db,,,,hgug4101a.db,,,,hgug4110b.db,,,,hgug4111a.db,,,,hgug4112a.db,,,,hgug4845a.db,,,,hguqiagenv3.db,,,,hi16cod.db,,,,hmdbquery,,,,HS25KResogen.db,,,,HS6UG171.DB,,,,hsagilentdesign026652.db,,,,hta20probeset.db,,,,hta20transcriptcluster.db,,,,hthgu133a.db,,,,hthgu133b.db,,,,hu35kkuba.db,,,,hu35ksubb.db,,,,hu35ksubc.db,,,,hu35ksubd.db,,,,Hu6800.db,,,,huex10stprobeset.db,,,,huex10sttranscriptcluster.db,,,,Hugene10stprobeset.db,,,,hugene10sttranscriptcluster.db,,,,hugene11stprobeset.db,,,,hugene11sttranscriptcluster.db,,,,Hugene20stprobeset.db,,,,Hugene20SttranscriptCluster.db,,,,Hugene21stprobeset.db,,,,hugene21sttranscriptcluster.db,,,,huo22.db,,,,hwgcod.db,,,,Illuminahumanmethylation27K.DB,,,,Illuminahumanv1.db,,,,Illuminahumanv2.db,,,,Illuminahumanv2beadid.db,,,,Illuminahumanv3.db,,,,Illuminahumanv4.db,,,,Illuminahumanwgdaslv3.db,,,,Illuminahumanwgdaslv4.db,,,,Illuminamousev1.db,,,,Illuminamousev1p1.db,,,,Illuminamousev2.db,,,,limuminaratv1.db,,,,indac.db,,,,jazaerimetadata.db,,,,lapointe.db,,,,Lumihumanall.db,,,,Lumimimoseall.db,,,,Lumiratall.db,,,,m10kcod.db,,,,m20kcod.db,,,,迈格巴克,,,,元基因组,,,,mgu74a.db,,,,mgu74av2.db,,,,mgu74b.db,,,,mgu74bv2.db,,,,mgu74c.db,,,,mgu74cv2.db,,,,mguatlas5k.db,,,,mgug4104a.db,,,,mgug4120a.db,,,,mgug4121a.db,,,,mgug4122a.db,,,,mi16cod.db,,,,mirbaseversions.db,,,,MLP,,,,mm24kresogen.db,,,,mmagilentdesign026655.db,,,,Moe430a.db,,,,MOE430B.DB,,,,moex10stprobeset.db,,,,moex10sttranscriptcluster.db,,,,mogene10stprobeset.db,,,,mogene10sttranscriptcluster.db,,,,mogene11stprobeset.db,,,,mogene11sttranscriptcluster.db,,,,mogene20stprobeset.db,,,,mogene20sttranscriptcluster.db,,,,mogene21stprobeset.db,,,,mogene21sttranscriptcluster.db,,,,鼠标4302.DB,,,,鼠标430a2.db,,,,mpedbarray.db,,,,mta10probeset.db,,,,mta10transcriptcluster.db,,,,mu11ksuba.db,,,,mu11ksubb.db,,,,mu15v1.db,,,,mu19ksuba.db,,,,mu19ksubb.db,,,,mu19ksubc.db,,,,mu22v3.db,,,,mwgcod.db,,,,挪威981.db,,,,Nugohs1a520180.db,,,,nugomm1a520177.db,,,,Operonhumanv3.db,,,,org.ag.eg.db,,,,org.at.tair.db,,,,org.bt.eg.db,,,,org.ce.eg.db,,,,org.cf.eg.db,,,,org.dm.eg.db,,,,org.dr.eg.db,,,,org.eck12.eg.db,,,,org.ecsakai.eg.db,,,,org.gg.eg.db,,,,org.hs.eg.db,,,,org.mm.eg.db,,,,org.mmu.eg.db,,,,org.pf.plasmo.db,,,,org.pt.eg.db,,,,org.rn.eg.db,,,,org.sc.sgd.db,,,,org.ss.eg.db,,,,org.xl.eg.db,,,,网页排名,,,,PartheenMetadata.db,,,,PCXN,,,,PEDBARRAYV10.DB,,,,PEDBARRAYV9.DB,,,,pocrcannotation.db,,,,,,,,彪马,,,,r10kcod.db,,,,rae230a.db,,,,rae230b.db,,,,RAEX10STPROBESET.DB,,,,raex10sttranscriptcluster.db,,,,ragene10stprobeset.db,,,,ragene10sttranscriptcluster.db,,,,ragene11stprobeset.db,,,,ragene11sttranscriptcluster.db,,,,ragene20stprobeset.db,,,,ragene20sttranscriptcluster.db,,,,ragene21stprobeset.db,,,,ragene21sttranscriptcluster.db,,,,RAT2302.DB,,,,rgu34a.db,,,,rgu34b.db,,,,rgu34c.db,,,,rguatlas4k.db,,,,RGUG4105A.DB,,,,rgug4130a.db,,,,RGUG4131A.DB,,,,ri16cod.db,,,,rnagilentdesign028282.db,,,,rnbeads,,,,rnu34.db,,,,Roberts2005 Annotation.db,,,,rta10probeset.db,,,,rta10transcriptcluster.db,,,,rtu34.db,,,,rwgcod.db,,,,shdz.db,,,,siggenes,,,,总结性特征,,,,U133x3p.db,,,,xlaevis.db,,,,酵母2.DB,,,,YGS98.DB,,,,Zebrafish.db
链接到我
构建报告

包装档案

跟随bob 体育网址 在R会话中使用此软件包的说明。

源包 Annotate_1.68.0.tar.gz
Windows二进制 Annotate_1.68.0.zip
MacOS 10.13(高山脉) Annotate_1.68.0.tgz
源存储库 git克隆https://git.bioconductor.org/packages/annotate
源存储库(开发人员访问) git clone git@git.bioconductor.org:包装/注释
包装短URL //www.anjoumacpherson.com/packages/annotate/
软件包下载报告 下载统计

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