1.9.3版本的变化——小拼写和布局修改装饰图案,——@PeteHaitch更正表布局的装饰图案改变1.9.2版本——小文档修改版本变化1.9.1——斯宾塞Nystrom join_nearest家族多次重大贡献的功能:1。join_nearest_ (x, y,…,距离= TRUE)家族的功能现在需要一个新的论点,距离,它允许用户添加一个列的距离最近的,在x y范围。2。add_nearest_distance_ (x, y,…)的功能,这将添加一个新的元数据列的x范围对象包含距离其最近的邻居y。如果没有最近的邻居,新列将缺失值。1.7.16 -重构版本选择内部的变化,改进速度当铸造一个农庄组织- >版本1.7.15 DataFrame变化-进一步修复减少/分离内部版本变化1.7.14 -修复减少/分离内部清理分离情况下发生膨胀的变化版本1.7.13 - tidyselect版本设置为v 1.0 -设置授权范围覆盖方法解决文档bam阅读版本1.7.11变化——从tidyselect:: vars_select tidyselect ():: eval_select()的变化版本1.7.7 -更新处理列表的列,expand_ranges()不再需要笛卡儿积如果列表是平行的。总结()正确处理列表列输出没有列数。版本变化1.7.6 dplyr -添加方法::sample_n()版本1.7.5的变化——固定范围建设问题# 62,的as_granges()和as_iranges()函数现在正确处理列表列——添加辅助函数来处理名称范围。看到了什么? ranges-names细节。1.7.4版本的变化——添加片()范围,和GroupedRanges——内部分组已经调整,但不应该任何用户面临的变化。现在生成分组快得多。 - group information can be interrogated with dplyr::group_keys() - a GRangesList can be obtained automatically from a GroupedGenomicRanges with dplyr::group_split() - group indices can be generated with dplyr::group_indices() Changes in version 1.7.3 - shift_downstream() and shift_upstream() now properly handle vector amounts of shift. Fixes issue #73 Changes in version 1.7.2 - Left outer join overlap operations now work if either x or y have no metadata columns see #70 - Left outer join overlap operations will also correctly behave in situations when there are no non-overlapping ranges. - Left outer join overlaps no longer modify seqinfo (see here)[https://support.bioconductor.org/p/125623/] - patch left outer join when x or y are IRanges, flesh out overlaps documentation. Changes in version 1.7.1 - Reformatting NEWS.md so no longer softlinks to inst/NEWS Changes in version 1.5.13 - plyranges release and devel have removed unnest() and replaced it with expand_ranges() due to changes in the tidyr API. Please replace all uses of this function with expand_ranges() Changes in version 1.3.4 - fixed bind_ranges so it preserves rownames Changes in version 1.1.5 - enable right generics to be called upon invoking plyranges functions without loading plyranges Changes in version 1.1.4 - added tile/window methods - fixed up documentation Changes in version 1.1.3 - doc updates Changes in version 1.1.2 - speed up of group_by methods - refactor of BAM reading utilities Changes in version 0.99.10 - refactored set_width out so it's called internally by mutate - along with set_width there are other internal set_ methods - add _within_directed variants for overlaps methods - modified overscope_ranges to be an S3 method, should enable more refactoring in the future Changes in version 0.99.9 //www.anjoumacpherson.com/packages/devel/bioc/html/plyranges.html - package passed review and is now on Bioconductor devel branch! - I've been pretty slack with updating the NEWS file but will be more diligent in the future.