SpidermiR - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -功能* SpidermiRquery_species搜索第一个版本的物种。* SpidermiRquery_networks_type网络搜索的类别。* SpidermiRquery_spec_networks搜索的物种,和网络分类。* SpidermiRquery_disease miRNA-disease搜索。* SpidermiRdownload_net下载网络数据。* SpidermiRdownload_pharmacomir下载microrna的目标和从数据库PharmacomiR gene-drug交互。* SpidermiRdownload_miRNAvalidate下载microrna的验证数据库* SpidermiRprepare_NET准备矩阵与运用基因的基因网络ID,和基因符号。* SpidermiRanalyze_mirna_network microRNA-target交互的集成。* SpidermiRanalyze_mirna_gene_complnet microRNA-target完成交互的集成。* SpidermiRanalyze_mirna_extra_cir细胞外的集成/循环microrna。 * SpidermiRanalyze_direct_net Searching by biomarkers of interest with direct interaction. * SpidermiRanalyze_direct_subnetwork Network composed by only the nodes in biomarkers of interest. * SpidermiRanalyze_subnetwork_neigh Network composed by the nodes in biomarker of interest and all the edges among this brunch of nodes. * SpidermiRanalyze_degree_centrality Ranking degree centrality genes. * SpidermiRanalyze_Community_detection Find community detection. * SpidermiRanalyze_Community_detection_net Find the network of community detection. * SpidermiRanalyze_Community_detection_bi Community detection from biomarkers of interest. * SpidermiRanalyze_mirnanet_pharm Integration of pharmacomiR in the network. * SpidermiRvisualize_mirnanet Visualize Integration of direct gene network and direct-miRNA information. * SpidermiRvisualize_BI Visualize the network from a set of biomarkers of interest. * SpidermiRvisualize_plot_target Visualize the plot with miRNAs and the number of their targets in the network.