版本1.12的更改-------------------------------添加了Max.OverLaps和Min.Semtement.Length,以提供对连接器的进一步控制。Max.OverLaps取代MaxoverLapsConnectors,但两者仍然可以用于遗产目的1.10 --------------------------------------------------------------------------通过Parselabels(true/fals)标签 - 超级骑行GGRIDS GGREPEL的新默认值为Max.overLaps通过介绍MaxoverLapsConnectors = 15-用户现在可以通过DirectionConnectors指定连接器的方向 - 删除LabHjust and LabVjust-添加了PCUTOFFCOL-添加了PCUTOFFCOL(VIA ANDREA GRIONI)(通过Andreai)CHANGES IN VERSION 1.8 ------------------------ - added functionality to encircle variables of interest - added option to remove arrowheads on connectors - added option to rasterise images通过ggrastr :: geom_point_rast(benjamin ostendorf) - 更改axis.text.y = element_text(...,vjust = 1.0)到0.5(benjamin ostendorf)版本1.6 ---------------------------删除了Ligendvisible和PlabellingCutoff参数 - 弃用的转录点size,TranscriptLabsize,TranscriptLabcol,TranscriptLabface,Transcriptl,TranscriptlAbhjust,Transcriptlabvjust,BoxedLabels和DrawConnectors参数 - 现在pad Xlim by +/- 1-移动标签的默认位置是其相应点的核心 - 添加了“ colgradient”,它们在版本1.4 1.4的p值更改中连续颜色点上颜色点数。-----------------------------------------------------------------发现p值为0的行为:现在将它们转换为10^-1 *最低的非零p -value-添加了新的对讲机“ legendlabels”,它允许用户在图例标签中使用表达式 - 添加对tibbles的支持 - 转录点size,TranscriptLabsize,TranscriptLabcol,TranscriptLabcol,TranscriptLabface,TranscriptLabhjust和TranscriptLabvjust现在已删除。使用点,Labsize,LabCol,LabFace,LabHjust和LabVjust,分别为现在已弃用的默认设置为2.0 -BoxedLabels。Use boxedLabels CHANGES IN VERSION 1.2 ------------------------ - added functionality to shade specific genes in the plot space (parameters: shade, shadeLabel, shadeAlpha, shadeFill, shadeSize, shadeBins) - added new parameters 'labhjust' and 'labvjust' for fine tuning position of labels - suppress warnings about removal of missing values - now easier to hide the legend via legendVisible = TRUE/FALSE - changed 'colOverride' to 'colCustom' - added a new 'shape' parameter to control the shape of plotted points - added a new 'shapeCustom' parameter, akin to functionality supplied by 'colCustom' (formerly 'colOverride') - added functionality to add title, subtitle, and caption (parameters: title, subtitle, caption, titleLabSize, subtitleLabSize, captionLabSize = 12) - added functionality to add extra vertical and horizontal lines (parameters: hline, hlineType, hlineCol, hlineWidth, vline, vlineType, vlineCol, vlineWidth) - changed 'colConnectors' default from "black" to "grey10" - added extra parameters for line connectors (parameters: typeConnectors, endsConnectors, lengthConnectors) - 'labhjust' and 'labvjust' are now 'transcriptLabhjust' and 'transcriptLabvjust', respectively - user can now specify to draw transcript labels as text and text in boxes via 'boxedlabels' (TRUE/FALSE) - drawconnectors now deprecated. Use drawConnectors CHANGES IN VERSION 1.0.0 ------------------------ - user can now supply her/his/its own colour vector to label the points - default is to now draw grid lines and only have left and bottom borders - when selectLab is not NULL, even variables that do not pass the thresholds are now labelled along with those that do, even when DrawConnectors is either TRUE or FALSE. - correctly catches non-numeric x and / or y variables, and throws error. - the function now tolerates P values of 0 (zero) and replaces these with the lowest possible double value, given a user's specific computer architecture and R version.