PING

DOI:10.18129/B9.bioc.PING

This is thedevelopmentversion of PING; for the stable release version, seePING.

Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data

Bioconductor version: Development (3.17)

Probabilistic inference of ChIP-Seq using an empirical Bayes mixture model approach.

Author: Xuekui Zhang , Raphael Gottardo , Sangsoon Woo

Maintainer: Renan Sauteraud

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") # The following initializes usage of Bioc devel BiocManager::install(version='devel') BiocManager::install("PING")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

PDF		Reference Manual
Text		NEWS

Details

biocViews	Clustering,Sequencing,Software,StatisticalMethod,Visualization
Version	2.43.0
In Bioconductor since	BioC 2.10 (R-2.15) (11 years)
License	Artistic-2.0
Depends	R (>= 3.5.0)
Imports	methods,PICS, graphics, grDevices, stats,Gviz,fda,BSgenome, stats4,BiocGenerics,IRanges,GenomicRanges,S4Vectors
LinkingTo
Suggests	parallel,ShortRead,rtracklayer
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Followbob 体育网址 指示在R会话中使用这个包.

Source Package	PING_2.43.0.tar.gz
Windows Binary	PING_2.43.0.zip
macOS Binary (x86_64)	PING_2.43.0.tgz
macOS Binary (arm64)	PING_2.43.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/PING
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/PING
Bioc Package Browser	https://code.bioconductor.org/browse/PING/
Package Short Url	//www.anjoumacpherson.com/packages/PING/
Package Downloads Report	Download Stats