生物根系

DOI:10.18129 / B9.bioc.BiocGenerics

生物导体中使用的S4通用功能

Biocometiond版本:释放(3.12)

该包定义了Bioconductor中使用的S4通用函数。

作者:Bioconductor开发团队

维护者:Bioconductor Package维护者

引文(从R内,输入引用(“BiocGenerics”)):

安装

要安装此软件包,请启动R(版本“4.0”)并输入:

if(!percennamespace(“biocmanager”,squilly = true))install.packages(“biocmanager”)biocmanager ::安装(“生物根系术”)

有关较旧版本的R,请参阅适当的生物导体释放

文件

PDF. 参考手册

细节

Biocviews. 基础设施,软件
版本 0.36.1
在生物导体中以来 BIOC 2.10(R-2.15)(9年)
许可证 艺术-2.0
取决于 R(> = 4.0.0),方法,UTI,图形,统计数据,并行
进口 方法,Utils,图形,统计数据,并行
链接
建议 Biobase,S4Vectors,绞喉,Genomicranges.,delayedarray,生物仪器,RSAMTOOLS.,annotationdbi.,敬服,affyPLM,deseq2.,flowClust,MSnbase,注释,RUnit
SystemRequirements
加强
URL https://biocumon.org/packages/biocgenerics.
BugReports https://github.com/bioconductor/biocgenerics/issues.
取决于我 ACME,敬服,affyPLM,altcdfenvs.,amplican,annotationdbi.,annotationforge.,annotationhub.,ATACseqQC,Beadarray.,Bioassayr.,Biobase,生物仪器,BNBC.,BSgenome,BSSeq.,红衣主教,类别,CompoundationCompare.,Champdata.,chipseq,ChIPseqR,ChromheatMap.,cleanUpdTSeq,丁浓缩,codelink,共识,consensusSeekeR,copynumber,CRISPRseek,腰带,delayedarray,DESEQ.,de,Ensembldb.,Ensemblvep.,实验室,实验室,GDSArray,geneplotter,Genomeinfodb.,GenomeIntervals.,GenomicAlignments,GenomicFeatures,基因组夫妇,Genomicranges.,基因组织,Genoset.,ggbio,girafe,图形,GSEABase,GUIDESEQ.,Helloranges.,interactiveDisplay,interactiveDisplayBase,绞喉,liftOver,Mbased.,meshdbi.,methyAnalysis,MIGSA,雷尼卡,minfi,ml interfaces.,motifdb.,图案,MPRA.,MSnbase,,NADfinder,ngsReports,oligo.,OrganismDbi,潘达尔,紫红色,普利兰语,波特拉,profileplyr,Psicquic.,Pwmenrich.,QSutils,Rarevariantvis.,REDseq,Repitools,rnaprobr.,RnBeads,RPA.,rsbml.,S4Vectors,scsR,sh,ShortRead,simpleaff.,simplifyencrice.,Simulatorz.,soGGi,spqn,StrafturalVariantAnnotation.,摘要博马克,TEQC.,蒂格雷,Topdownr.,顶点,撤销,Uniprot.ws.,香草,VariantAnnotation.,变型滤波器,VCFArray,xvector.,山姆斯
进口我 a4preproc.,倍感工具,affylmGUI,等位基因矛纪,AneuFinder,annmap,注释,AnnotationHubData,ArrayExpresshts.,Aspli.,AUCell,bambu,Bamsignals.,基础知识,后面;,beachmat,大梅隆,生物剧本,BiocIO,BiocSingular,biotmle,biovizBase,Biscuiteer.,Biseq.,blima,断点,BrowserViz,BSgenome,BubbleTree,Bumphunter.,BUSpaRse,CageFightr.,蛋糕,卡斯珀,Celaref.,cellarepertorium.,cellHTS2,CellMixS,蜂窝线,cgdv17.,CGHMCR.,ChemmineDrugs,ChemmineOB,ChemmineR,别致,浮雕,chipenrich,chipenrich.data,ChIPpeakAnno,ChIPQC,ChipSeeker.,chipseq,ChIPSeqSpike,铬星座,chromVAR,西塞罗,Clusterseq.,cn.mops,cn,CNVPanelizer,cnvranger.,可可,可乐,compEpiTools,cont,CoreGx,crlmm,Crossmeta.,CSAW.,ctggem.,腰带,curatedCRCData,curatedOvarianData,Cydar.,达达2,daglogo.,DAMEFINDER.,DDCT.,decomptumor2sig,重新评估,DelayedDataFrame,derfinder,descan2.,deseq2.,命运,德沃瑟,DEXSeq,diffcoexp,Diffhic.,DirichletMultinomial,过度性,德里姆瑟克,Dropletuls.,药物潜行酶,easyrnaseq.,ebimage.,EDASeq,eiR,eisa,eisaR,enrichTF,Epigenomix.,EpiTxDb,epivizrChart,epivizrestalone.,erma,esatac.,家庭,fastseg,ffpe,findmyfriends.,流动,flowClust,流量计,flowFP,流动,弗洛克斯普克斯,流动的东西,flowWorkspace,FMCSR.,弗雷泽,frma.,funcisnp.,Ga4ghclient.,GA4GHshiny,gcapc,GenBankr.,基因测定,Geneclassifiers.,Genefilter.,创世纪,GenomicAlignments,基因组互动,基因组,genotypeeval,GenVisR,GGBase.,GGTools.,GMAPR.,gmoviz,Goseq.,哥特,gpuMagic,gQTLBase,gQTLstats,GSVA,GVIZ.,HDF5Array,的热图,希尔达,hiReadsProcessor,霍波哈,htseqgenie.,icetea,IGVR.,IHW,ihwpaper.,ima,地狱,检查,,incansv.,InteractionSet,感兴趣,离子,iSEE,IsoformSwitchAnalyzeR,Isomirs.,iva,JunctionSeq.,KCsmart,KeggandmetAcoredZpathwaysGego.,KEGGdzPathwaysGEO,ldblock,萝拉,微波激射器,桅杆,,一顿饭,Meshr.,梅德斯,METASEQR2.,MethiLheritsim.,MethylAid,甲基皮脂,弥撒,Methyvim.,mimager,MinimumDistance,米拉,幻影,MissMethyl.,mmapp2.,modstrings.,沼泽,单片,motifbreakR,MouseGastrulationData,MSA.,msnid.,MultiAsaySayexperiment.,多射线,多atAdataset.,多米尔,mutationalpatterns.,mzR,ringerpeaks.,ncdfFlow,nearBynding,npGSEA,核核酸,oligoClasses,omicslonda.,openCyto,OpenProper.,orfik.,探险者,帕尔布斯,pathwaysplice.,pcaMethods,pdInfoBuilder,phemd,文学,π,钢琴,,普拉斯,Podkat.,普拉达,婴儿车,妊娠期,博士,profileScoreDist,ProMoC.,pRolocGUI,PureCN,粉末,QFeatures,qplexAnalyzer.,qsea,Quasr.,R3CPET.,R453Plus1Toolbox,raggedexperiment.,Ramwas.,r,美国广播公司,rcistarget.,RCy3,RCyjs,补偿,REMP,ReportingTools.,RGalaxy,RGMQL.,RGSEA,riboprofiling,RibosomeProfiling QC,林格,rjmcmcncnucosomes.,rnaeditr.,ramodr.,rnamodr.allanilineseq.,RNAmodR。毫升,RNAmodR。RiboMethSeq,怒吼,的方式,Rqc,rqubic.,RSAMTOOLS.,rsbml.,rscudo.,RTCGAToolbox,rtracklayer.,SC3,撒尿,scDblFinder,scmap,SCnorm,范围,SCPIPE.,食物,scRNAseq,颈背,sc,SEQVARTOOLS.,塞塞伦,SGSEQ.,SharedObject.,签收,simpleaff.,SingleCellExperiment,SingleCellMultiModal,singleCellTK,SLGI,斯文,snplocs.hsapiens.dbsnp144.grch37.,snplocs.hsapiens.dbsnp144.grch38.,snplocs.hsapiens.dbsnp149.grch38.,snplocs.hsapiens.dbsnp150.grch38.,SNPlocs.Hsapiens.dbSNP151.GRCh38,snpStats,Spicyr.,泼溅,拼接照片,sqldataframe.,sRACIPE,sscu,斯坦,strandCheckR,飘带,Structstrings,SummarizedExperiment,synmut.,systempiperdata.,Tapseq.,目标,tarseqqc.,tcgautils.,TCseq,tenxbusdata.,TFBStools.,Titancna.,TrackViewer.,经纪人,石棉水泥板,TransView,树ummariedexperiment.,tRNA,trnadbimport.,tRNAscanImport,TSRchitect,TVTB.,Ularcirc,unifiedWMWqPCR,universalmotif,Usort.,VariantTools,VariantToolsData,伶盗龙,wavClusteR,weitrix,XCMS.,XDE,xtrasnplocs.hsapiens.dbsnp144.grch37.,xtrasnplocs.hsapiens.dbsnp144.grch38.,xvector.
建议我 acde,AggregateBiovar.,目的,arraytv.,资产,baalchip.,贝凯,BDMMAcorrect,大梅隆,bigmemoryextras.,重音,BiocCheck,生物相投,BiocStyle,Biocviews.,BIOMM,biosigner,生物威尔,布尔玛,Buscorrect.,咖啡馆,相机,癌症,cand,CausalR,ccrepe,Cellnoptr.,Cexor.,ChIPanalyser,ChIPXpress,CHRONOS,CINdex,限幅器,clonotyper.,clustComp,cnorfeeder.,CNORfuzzy,coexnet,彗星,ConnectItivityMap.,共识,Cosmiq.,COSNet,cpvsnp.,cytotree,达巴马尔,DBChIP,DEsubs,dmrcaller.,DMRcate,ENCODExplorer,Encodexplorerdata.,增强型volcano.,ENmix,epinem.,eventPointer.,fCCAC,fcScan,FGNet.,FieldEffectCrc,flowCL,flowCut,flowlepositoryr.,fl,flowTime,FMRS.,focalCall,GateFinder.,gCrisprTools,GDSFMT.,宝石,GenenetWorkBuilder.,GeneOverlap,Geneplast.,generxcluster.,Genetclassifier,基因组,GEOquery,GMRP,古司裤,GraphPac.,GreyListChIP,Grndata.,Gwastools.,H5VC,哈曼,HarmanData,Hiannotator.,hierGWAS,Hireewas.,超图,iCARE,iclusterplus.,illuminaio,inpas.,INPower,IPO,烤肉串,凯格斯特,花边,,LRBase.Ath.eg.db,lrbase.bta.eg.db.,LRBase.Cel.eg.db,LRBase.Dme.eg.db,LRBase.Dre.eg.db,LRBase.Gga.eg.db,LRBase.Hsa.eg.db,LRBase.Mmu.eg.db,LRBase.Pab.eg.db,lrbase.rno.eg.db.,LRBase.Ssc.eg.db,lrbase.xtr.eg.db.,LRBaseDbi,mapkl.,massiR,MatrixRider,m,mCSEA,mdgsa,Mergeomics,mesh.aca.eg.db.,MeSH.Aga.PEST.eg.db,mesh.ame.eg.db.,mesh.aml.eg.db.,MeSH.Ana.eg.db,MeSH.Ani.FGSC.eg.db,mesh.aor.db.,mesh.ath.eg.db.,MeSH.Bfl.eg.db,MeSH.Bsu.168.eg.db,MeSH.Bta.eg.db,MeSH.Cal.SC5314.eg.db,MeSH.Cbr.eg.db,mesh.cel.eg.db.,MeSH.Cfa.eg.db,MeSH.Cin.eg.db,mesh.cja.eg.db.,MeSH.Cpo.eg.db,mesh.cre.eg.db.,mesh.dan.eg.db.,MeSH.db,MeSH.Dda.3937.eg.db,MeSH.Ddi.AX4.eg.db,MeSH.Der.eg.db,mesh.dgr.eg.db.,mesh.dme.eg.db.,mesh.dmo.eg.db.,mesh.dpe.eg.db.,mesh.dre.eg.db.,mesh.dse.eg.db.,mesh.dsi.eg.db.,mesh.dvi.eg.db.,MeSH.Dya.eg.db,mesh.eca.eg.db.,mesh.eco.55989.eg.db.,MeSH.Eco.ED1a.eg.db,MeSH.Eco.IAI39.eg.db,MeSH.Eco.K12.MG1655.eg.db,MeSH.Eco.O157.H7.Sakai.eg.db,MeSH.Eco.UMN026.eg.db,MeSH.Eqc.eg.db,MeSH.Gga.eg.db,mesh.gma.eg.db.,mesh.hsa.eg.db.,mesh.laf.eg.db.,MeSH.Lma.eg.db,MeSH.Mdo.eg.db,MeSH.Mes.eg.db,mesh.mga.eg.db.,MeSH.Miy.eg.db,mesh.mml.eg.db.,mesh.mmu.eg.db.,mesh.mtr.eg.db.,mesh.nle.eg.db.,MeSH.Oan.eg.db,mesh.ocu.eg.db.,MeSH.Oni.eg.db,MeSH.Osa.eg.db,MeSH.Pab.eg.db,mesh.pae.pao1.eg.db.,mesh.pcr.db.,mesh.pfa.3d7.eg.db.,MeSH.Pto.eg.db,mesh.ptr.eg.db.,MeSH.Rno.eg.db,mesh.sce.s288c.eg.db.,MeSH.Sco.A32.eg.db,mesh.sil.eg.db.,mesh.spu.eg.db.,MeSH.Ssc.eg.db,mesh.syn.eg.db.,MeSH.Tbr.9274.eg.db,MeSH.Tgo.ME49.eg.db,MeSH.Tgu.eg.db,mesh.vvi.eg.db.,MeSH.Xla.eg.db,MeSH.Xtr.eg.db,mesh.zma.eg.db.,代表,MetaboSignal,比赛,Metagene2.,MetagenomeSQ.,metaseqr.,MetCirc,methylCC,甲基术,MetNet,微生物组,microRNAome,migsadata.,miRBaseConverter,Mircomp.,米林斯特,米尔拉布,Mirsynergy,MNEM.,Motifstack.,MSEADbi,multiClust,多电脑,multiomicsviz,mwastools.,NBSplice,ncrnatools.,NetBenchmark.,netbiov,Netsam.,nondetects,诺斯,nucleoSim,OMICsPCA,骨科,PAA.,panelcn.mops,path2ppi.,PathNet,Pathview.,pcatools.,Pepxmltab.,PGA.,Pharmacogx.,Phenstat.,Powertcr.,,验证,挑战,Pwrewas.,pwrEWAS.data,qpgraph,Quantro.,Quartpac.,RBGL.,rBiopaxParser,rcade.,rcellminer,rcgh.,Rcpi,REBET,重新平行,rfarm.,RGraph2js,Rgraphviz,rgsepd,riboSeqR,ROntoTools,ropls,ROSeq,rtn.,Rtnduals.,RTNsurvival,rtrm.,Saigegds.,仙人掌,sangerseq.,Sapfinder.,吓人,scdataviz,抚慰,用水晶球占卜,Semmentseq.,SEQARRAY.,seqpattern.,seqtools.,Sesamedata.,SICtools,sigFeature,sigsquared,西马特,SamessPeak.,simlr.,单歌者,弹弓,SNPRelate,寄居,spacepac.,屁股赛,Sparsesignatures.,spatialHeatmap,specL,议案,STRINGdb,Systempiper.,TCC.,tfea.chip.,,transcriptogramer,拖拉器,treeandleaf,特纳,TRONCO,Uniquorn,variancepartition.,不了
链接给我
建立报告

包档案包

遵循bob 体育网址 在r会话中使用此包的说明。

源包 BiocGenerics_0.36.1.tar.gz
Windows二进制 biocgenerics_0.36.1.zip.
macOS 10.13 (High Sierra) BiocGenerics_0.36.1.tgz
源库 git clone https://git.biocumon.org/packages/biocgenerics.
源存储库(开发人员访问) git克隆git@git.bioconductor.org:包/ BiocGenerics
包短Url //www.anjoumacpherson.com/packages/BiocGenerics/
包下载报告 下载统计信息
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