生物酶

doi:10.18129/b9.bioc.biobase

生物酶:生物导体的基础功能

生物导体版本:版本(3.15)

许多其他软件包所需的功能或替换R功能。

作者:R。Gentleman,V。Carey,M。Morgan,S。Falcon

维护者:bioconductor.org>的生物导体套件维护器<维护器>

引用(从r内,输入引用(“生物酶”)):

安装

要安装此软件包,请启动R(版本“ 4.2”)并输入:

if(!quired(“ Biocmanager”,悄悄= true))install.packages(“ Biocmanager”)Biocmanager :: install(“ Biobase”)

对于R的较旧版本,请参考适当的生物导体释放

文档

要查看系统中安装此软件包的版本的文档,请启动R并输入:

Browsevignettes(“生物碱”)

PDF R脚本 生物酶和表达组的简介
PDF R脚本 介绍
PDF R脚本 ESET开发人员的注释bob电竞体育官网
PDF 参考手册
文本 消息

细节

生物浏览 基础设施,,,,软件
版本 2.56.0
在生物导体中 Bioc 1.6(R-2.1)或更早(> 17年)
执照 艺术2.0
要看 r(> = 2.10),生物基因(> = 0.27.1),UTILS
进口 方法
链接
建议 工具,tkwidgets,,,,全部,,,,运行,,,,golubeset
系统要求
增强
URL //www.anjoumacpherson.com/packages/biobase
BugReports https://github.com/bioconductor/biobase/issues
取决于我 Acme,,,,副词,,,,AffyComp,,,,AffyCompData,,,,Affycontam,,,,Affycoretools,,,,affyplm,,,,Agdex,,,,agimicrorna,,,,目标,,,,全部,,,,altcdfenvs,,,,安菲,,,,AnnotationDbi,,,,注释,,,,抗fofilesdata,,,,ArrayExpress,,,,arraymvout,,,,自动调节器,,,,,,,,班尔,,,,bcellviper,,,,Beadarray,,,,Beadarrayexampledata,,,,Beadarraysnp,,,,BGX,,,,Bicare,,,,Bigmelon,,,,生物学家,,,,Biomvcclass,,,,Bioqc,,,,BladderBatch,,,,blma,,,,北方,,,,Brgedata,,,,相机,,,,cancerclass,,,,癌症,,,,卡斯珀,,,,类别,,,,类别Compare,,,,CCL4,,,,ccpromise,,,,CellHTS2,,,,CGHBASE,,,,CGHCALL,,,,cghrigions,,,,克利普达,,,,Cll,,,,,,,,CMA,,,,CN.Farms,,,,codelink,,,,科隆卡,,,,兑换,,,,,,,,,,,,covrna,,,,CRCL18,,,,策展人,,,,David Tiling,,,,dexseq,,,,DFP,,,,Diggit,,,,DIGGITDATA,,,,DLBCL,,,,doppelgangr,,,,装扮,,,,DSS,,,,染料,,,,ebarrays,,,,EDASEQ,,,,边缘,,,,Egsea,,,,Epgenomix,,,,epivizrdata,,,,ETEC16S,,,,eupathdb,,,,eximir,,,,表达,,,,法比亚,,,,Fabiadata,,,,事实设计,,,,fastseg,,,,纤维塞,,,,流面,,,,FRMA,,,,加加,,,,gaschyhs,,,,Genemeta,,,,Geneplotter,,,,genereCommender,,,,Generegionscan,,,,geneselectmmd,,,,GenetClassifier,,,,地球夫,,,,地理位置,,,,Geomxtools,,,,地球,,,,goexpress,,,,golubeset,,,,goprofiles,,,,gostats,,,,GSE103322,,,,GSE13015,,,,GSE62944,,,,gseabase,,,,GSEABENCHMARKER,,,,gsealm,,,,GSVADATA,,,,Gwastools,,,,hapfabia,,,,港口,,,,帮助,,,,Hiiragi2013,,,,霍巴赫,,,,htqpcr,,,,人类affydata,,,,人类系统,,,,杂交,,,,IBMQ,,,,Icheck,,,,IDEOVIZ,,,,惯用图,,,,检查,,,,isobar,,,,迭代,,,,IVAS,,,,iyer517,,,,孩子们,,,,Leebamviews,,,,白血病,,,,Lumi,,,,Lumibarnes,,,,lungexpression,,,,MACAT,,,,制造4,,,,Maendtoend,,,,MAPKL,,,,maqcsubset,,,,maqcsubsetilm,,,,Massir,,,,一顿饭,,,,化合物,,,,元基因组,,,,metagxbreast,,,,Metagxovarian,,,,metavizr,,,,冰毒,,,,甲基菌,,,,mfuzz,,,,米奇,,,,微生物塑料,,,,mimager,,,,含羞草,,,,米尼卡,,,,幻影,,,,mircomp,,,,mirnatarget,,,,mlinterfaces,,,,mmdiff2,,,,单片,,,,MSD16S,,,,MSNBase,,,,mulcom,,,,多胎,,,,多检验,,,,mvoutdata,,,,Nanostringdiff,,,,纳米林区,,,,纳米管,,,,Neve2006,,,,Noingsq,,,,无索引,,,,标准化450k,,,,NORMQPCR,,,,奥利戈,,,,Omicrexposom,,,,OrderedList,,,,耳管酶,,,,padog,,,,潘达,,,,,,,,pcamethods,,,,pdinfobuilder,,,,pepstat,,,,,,,,PLPE,,,,powsc,,,,preda,,,,predasampledata,,,,Prodata,,,,Prolocgui,,,,承诺,,,,ProstateCancerCamcap,,,,Prostatecancergrasso,,,,Prostatecancerstockholm,,,,Prostatecancertaylor,,,,ProstateCancerServarame,,,,Pumadata,,,,qpcrnorm,,,,QPLEXANALYZER,,,,R453plus1toolbox,,,,RBCBook1,,,,RBSURV,,,,rcellminer,,,,rcellminerdata,,,,readqpcr,,,,refplus,,,,rexposom,,,,林戈,,,,Risa,,,,rmagpie,,,,rnits,,,,RTCA,,,,rtopper,,,,ruvnormizedata,,,,Ruvseq,,,,安全的,,,,扫描,,,,seqgsea,,,,西格克,,,,siggenes,,,,Singlecelltk,,,,规范,,,,Spem,,,,SpikeInsubset,,,,Spktools,,,,碎片,,,,基质4,,,,总结性特征,,,,tcgacrcmirna,,,,TCGACRCMRNA,,,,tdaracne,,,,蒂格,,,,蒂格拉里,,,,topgo,,,,TPP,,,,翻译,,,,tspair,,,,Tweedeseqccountdata,,,,,,,,撤消,,,,vegamc,,,,毒蛇,,,,VSN,,,,西瓜,,,,Webbioc,,,,XDE,,,,,,,,Yeastcc
进口我 A4base,,,,a4classif,,,,A4核,,,,a4preproc,,,,Abarray,,,,高手,,,,ACGH,,,,adsplit,,,,Affyilm,,,,agimicrorna,,,,安夫,,,,Annmap,,,,注释,,,,AnnotationHubdata,,,,AnnotationTools,,,,arrayexpresshts,,,,ArrayQualityMetrics,,,,吸引,,,,舞会礼服,,,,基本,,,,贝斯诺克人,,,,BGEEDB,,,,生物室,,,,生物加工者,,,,生物浏览,,,,Bionet,,,,生物签名,,,,饼干,,,,Biseq,,,,Blima,,,,BloodCancermultiomics2017,,,,Bnem,,,,BSSEQ,,,,气泡,,,,咖啡店,,,,癌症,,,,红衣主教,,,,CCTORIAL,,,,细胞索,,,,蜂窝轨道,,,,CGHNMALALALALITER,,,,chipqc,,,,chipxpress,,,,ChromheatMap,,,,Chromswitch,,,,西塞罗,,,,快船,,,,clumsid,,,,CN. -ops,,,,可可,,,,coexnet,,,,Cogena,,,,组合,,,,化合物,,,,结论,,,,共识ClusterPlus,,,,共识,,,,共识,,,,警戒线,,,,coregx,,,,crlmm,,,,杂交,,,,ctggem,,,,腹带,,,,蓝滤器,,,,循环,,,,Cydar,,,,细胞瘤,,,,细胞动力,,,,达帕尔,,,,DDCT,,,,Debcam,,,,装饰,,,,DegReport,,,,deseq2,,,,Desousa2013,,,,命运,,,,葡萄球,,,,Dexmadata,,,,diffloop,,,,不和谐,,,,EasyRnaseq,,,,ebarrays,,,,Ecolitk,,,,埃加德,,,,enmix,,,,Ensembldb,,,,Erma,,,,Esetvis,,,,eximir,,,,Exphuntersuite,,,,表达式正式工作流,,,,农场,,,,FFPE,,,,Fletcher2013a,,,,flowclust,,,,流核,,,,FlowFP,,,,FlowMatch,,,,流程,,,,Flowspecs,,,,FlowStats,,,,流动性,,,,Flowviz,,,,FlowWorkspace,,,,弗雷泽,,,,FRMA,,,,Frmatools,,,,Gapgom,,,,gbscleanr,,,,gcrisprtools,,,,GCRMA,,,,GCSSCORE,,,,GenBankr,,,,遗传分类剂,,,,geneexpressionsignation,,,,GeneFilter,,,,Genemeta,,,,genereCommender,,,,Generegionscan,,,,创世纪,,,,GenomicFeatures,,,,基因组间,,,,GenomicsCores,,,,GenomicSupersignature,,,,GEOMXWORKFLOWS,,,,GeoSubsiend,,,,gep2pep,,,,gesper,,,,GGBIO,,,,girafe,,,,GISPA,,,,Globalancova,,,,全球测试,,,,GMAPR,,,,GSE13015,,,,GSRI,,,,GSVA,,,,GVIZ,,,,刺激性,,,,下摆,,,,爱马仕,,,,HGU133PLUS2CELLSCORE,,,,htqpcr,,,,htsfilter,,,,ihwpaper,,,,ImageHts,,,,免疫空间,,,,无限流,,,,inpas,,,,intad,,,,同工型间分析仪,,,,异种态,,,,Isomirs,,,,iterclust,,,,keggandmetacoredzpathwaysgeo,,,,keggdzpathwaysgeo,,,,,,,,LaPmix,,,,Liquidassociation,,,,lrbasedbi,,,,Maanova,,,,Mageckflute,,,,makecdfenv,,,,Masigpro,,,,桅杆,,,,MBPCR,,,,McSurvdata,,,,Meshdbi,,,,metaseqr2,,,,甲基化,,,,甲基接受,,,,甲基锁,,,,甲基菌,,,,MFA,,,,米奇,,,,微生物膜,,,,微生物膜标志物,,,,Migsa,,,,Minfi,,,,最小值,,,,Mipp,,,,米拉,,,,mirsm,,,,甲基小姐,,,,mlseq,,,,mmappr2,,,,莫格萨,,,,MOONLIGHTR,,,,Mosim,,,,MSNID,,,,多亚sayExexperiment,,,,Multiscan,,,,MZR,,,,NanostringQccpro,,,,ncdfflow,,,,Netzoor,,,,普通剂,,,,NPGSEA,,,,,,,,寡群,,,,Omicade4,,,,OmicsViewer,,,,Ontoproc,,,,opencyto,,,,负鼠,,,,OPPAR,,,,有机体,,,,,,,,phantasus,,,,Pharmacogx,,,,Phemd,,,,门索,,,,钢琴,,,,苍白,,,,plgem,,,,钳子,,,,podkat,,,,ppistats,,,,Prebs,,,,王子,,,,概率,,,,profia,,,,后代,,,,proloc,,,,prolocdata,,,,承诺,,,,道具,,,,蛋白质组学杂志,,,,protgear,,,,psea,,,,psygenet2r,,,,ptairms,,,,彪马,,,,属属,,,,PVAC,,,,PVCA,,,,杂种,,,,QCMetrics,,,,QDNASEQ,,,,qfeatures,,,,qpgraph,,,,Quantiseqr,,,,Quantro,,,,,,,,Qusage,,,,Radiogx,,,,兰德帕克,,,,报告工具,,,,安息,,,,,,,,rmagpie,,,,rmassbank,,,,rnainteract,,,,rnainteractmapk,,,,洛尔,,,,ropls,,,,腐烂,,,,rpsixml,,,,rqubic,,,,rscudo,,,,RTPCA,,,,rtreemix,,,,ruvnormiale,,,,scmap,,,,sctgif,,,,seqc,,,,Seqvartools,,,,Shortread,,,,signaturesearchdata,,,,sigspack,,,,sigsquared,,,,simbindprofiles,,,,唱歌,,,,Sitadela,,,,Slgi,,,,Smite,,,,躯体签名,,,,spatialdecon,,,,Spktools,,,,海绵,,,,待机,,,,stategra,,,,subseq,,,,突触,,,,teqc,,,,TFBSTOOLS,,,,时间科,,,,tmixclust,,,,TNT,,,,TopDownr,,,,有毒,,,,Tradeseq,,,,特拉维兹,,,,ttmap,,,,,,,,用户,,,,香草,,,,方差分区,,,,变体,,,,变体滤波器,,,,变体工具,,,,vidger,,,,瓦肯,,,,西瓜,,,,WPM,,,,XCMS,,,,Xeva
建议我 Aucell,,,,生物检查,,,,生物基因,,,,Bioconcotk,,,,Biotmledata,,,,乳腺癌,,,,乳腺癌,,,,乳腺癌,,,,乳腺癌,,,,乳腺癌,,,,乳腺癌,,,,BSGENOME,,,,CCTORIAL,,,,CellMapper,,,,Celltree,,,,clustcomp,,,,Coseq,,,,countclust,,,,,,,,dcanr,,,,dearseq,,,,多萝西娅,,,,染色比例样本,,,,EDGER,,,,ENMCB,,,,繁殖,,,,epivizr,,,,epivizrchart,,,,EPIVIZRSTANTALLONE,,,,农场,,,,Genefu,,,,Genie3,,,,基因组机,,,,GSAR,,,,GSGALGOR,,,,热倍,,,,HMP16SDATA,,,,HMP2DATA,,,,InteractiveSplay,,,,烤肉串,,,,莱斯,,,,林玛,,,,M3Drop,,,,哺乳动物,,,,Mapkldata,,,,MCSEA,,,,墨西拿,,,,MSA,,,,多lust,,,,OSAT,,,,PCATOOLS,,,,pkgdeptools,,,,rcistarget,,,,ReactomeGsa,,,,regparallel,,,,风湿性调节wollbold,,,,,,,,RTCGA,,,,评分,,,,Scmeth,,,,斯克兰,,,,Seqarray,,,,七十年代,,,,麻雀,,,,空间Heatmap,,,,斯塔格,,,,survomp,,,,TargetScore,,,,tcgabiolinks,,,,tfutils,,,,次级表演,,,,tkwidgets,,,,TypeInfo,,,,VBMP,,,,小部件,,,,Yeastexpdata,,,,yeastrnaseq
链接到我
构建报告

包装档案

跟随bob 体育网址 在R会话中使用此软件包的说明。

源包 Biobase_2.56.0.tar.gz
Windows二进制 Biobase_2.56.0.zip(仅64位)
MacOS 10.13(高山脉) Biobase_2.56.0.tgz
源存储库 git克隆https://git.bioconductor.org/packages/biobase
源存储库(开发人员访问) git clone git@git.bioconductor.org:包装/生物碱
包装短URL //www.anjoumacpherson.com/packages/biobase/
软件包下载报告 下载统计

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