此套餐适用于Biocumonds 3.7版;对于稳定的最新版本版本,请参阅Risa.。
生物导体版本:3.7
The Investigation / Study / Assay (ISA) tab-delimited format is a general purpose framework with which to collect and communicate complex metadata (i.e. sample characteristics, technologies used, type of measurements made) from experiments employing a combination of technologies, spanning from traditional approaches to high-throughput techniques. Risa allows to access metadata/data in ISA-Tab format and build Bioconductor data structures. Currently, data generated from microarray, flow cytometry and metabolomics-based (i.e. mass spectrometry) assays are supported. The package is extendable and efforts are undergoing to support metadata associated to proteomics assays.
作者:Alejandra Gonzalez-Beltran,Audrey Kauffmann,Steffen Neumann,Gabriella Rustici,Isa团队
维护者:Alejandra Gonzalez-Beltran
引文(从R内,输入引文(“RISA”)
):
要安装此包,请启动R并输入:
##尝试http://如果不支持https:// url源(“https://biocumon.org/bioclite.r”)Bioclite(“Risa”)
要查看系统中安装此包版本的文档,请启动r并输入:
BROWSEVIGNETTES(“RISA”)
PDF. | r script. | RISA:将实验元数据从ISA-Tab转换为生物导体数据结构 |
PDF. | 参考手册 | |
文本 | 消息 |
Biocviews. | 注解那DataImport.那质谱那软件 |
版本 | 1.22.0 |
在生物导体中以来 | BIOC 2.11(R-2.15)(6年) |
执照 | LGPL. |
依靠 | r(> = 2.0.9),BioBase.(> = 2.4.0),方法,rcpp.(> = 0.9.13),Biocviews.那敬服 |
进口 | XCMS. |
链接到 | |
建议 | FAAHKO.(> = 1.2.11) |
系统要求 | |
加强 | |
URL. | http://www.isa-tools.org/ |
Bugreports. | https://github.com/isa-tools/risa/issues. |
取决于我 | |
进口我 | |
建议我 | mtbls2. |
链接给我 | |
建立报告 |
跟随bob 体育网址 在r会话中使用此包的说明。
源包 | Risa_1.22.0.tar.gz. |
Windows二进制文件 | Risa_1.22.0.zip. |
Mac OS x 10.11(El Capitan) | RISA_1.22.0.TGZ. |
源存储库 | git clone https://git.biocumon.org/packages/risa. |
源存储库(开发人员访问) | git clone git@git.biocondion.org:包装/ risa |
包短网址 | http://biocumon.org/packages/risa/ |
包裹下载报告 | 下载统计信息 |