This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, seeRedeR.
Bioconductor version: 3.7
RedeR is an R-based package combined with a stand-alone Java application for interactive visualization and manipulation of modular structures, nested networks and multiple levels of hierarchical associations.
Author: Mauro Castro, Xin Wang, Florian Markowetz
Maintainer: Mauro Castro
Citation (from within R, entercitation("RedeR")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("//www.anjoumacpherson.com/biocLite.R") biocLite("RedeR")
查看文档version of this package installed in your system, start R and enter:
browseVignettes("RedeR")
HTML | R Script | RedeR: hierarchical network representation |
Reference Manual | ||
Text | NEWS |
biocViews | DataRepresentation,GraphAndNetwork,Infrastructure,Network,Software,Visualization |
Version | 1.28.0 |
In Bioconductor since | BioC 2.9 (R-2.14) (7 years) |
License | GPL (>= 2) |
Depends | R (>= 3.3.3), methods |
Imports | igraph |
LinkingTo | |
Suggests | pvclust,BiocStyle,knitr,rmarkdown |
SystemRequirements | Java Runtime Environment (>= 6) |
Enhances | |
URL | http://genomebiology.com/2012/13/4/R29 |
Depends On Me | Fletcher2013b |
Imports Me | Mulder2012,PANR,RTN,transcriptogramer |
Suggests Me | |
Links To Me | |
Build Report |
Followbob 体育网址 instructions to use this package in your R session.
Source Package | RedeR_1.28.0.tar.gz |
Windows Binary | RedeR_1.28.0.zip |
Mac OS X 10.11 (El Capitan) | RedeR_1.28.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/RedeR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RedeR |
Package Short Url | //www.anjoumacpherson.com/packages/RedeR/ |
Package Downloads Report | Download Stats |
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