BiocStyle

DOI:10.18129 / B9.bioc.BiocStyle

小插图和其他Bioconductor文档的标准样式

Bioconductor版本:Release (3.6)

为Bioconductor PDF和HTML文档提供标准格式样式。bob彩票平台包小插图说明使用和功能。

作者:安德烈·奥莱乌奇、马丁·摩根、沃尔夫冈·胡贝尔

维护者:Bioconductor Package维护者< Maintainer at Bioconductor .org>

引文(从R内,输入引用(“BiocStyle”)):

安装

要安装这个包,启动R并输入:

##尝试http://如果https:// url不支持源(“//www.anjoumacpherson.com/biocLite.R”)biocLite(“BiocStyle”)

文档

要查看系统中安装的此包版本的文档,请启动R并输入:

browseVignettes(“BiocStyle”)

PDF R脚本 生物导体乳胶风格2.0
超文本标记语言 R脚本 创作R Markdown小插图
PDF 参考手册
文本 新闻

细节

biocViews 软件
版本 2.6.1
在Bioconductor BioC 2.13 (R-3.0)(4.5年)
许可证 艺术- 2.0
取决于
进口 bookdown,knitr(> = 1.12),rmarkdown(>= 1.2), stats, utils,yaml
链接
建议 BiocGenerics,RUnit,htmltools
SystemRequirements
增强了
URL https://github.com/Bioconductor/BiocStyle
BugReports https://github.com/Bioconductor/BiocStyle/issues
全靠我 curatedBreastData
进口我 ASpli,BiocWorkflowTools,BubbleTree,chimeraviz,PathoStat,regionReport,Rqc
建议我 ABAData,ABAEnrichment,affycoretools,AHEnsDbs,AllelicImbalance,AMOUNTAIN,amplican,AneuFinder,AnnotationDbi,AnnotationFilter,AnnotationForge,AnnotationHub,AnnotationHubData,annotatr,anota2seq,apeglm,arrayQualityMetrics,ASGSCA,分配,ATACseqQC,AUCell,BaalChIP,培根,bamsignals,basecallQC,基础知识,BayesPeak,baySeq,beachmat,beadarray,BeadDataPackR,BgeeDB,bigmelon,bigmemoryExtras,bioassayR,bioCancer,BiocFileCache,BioCor,BiocParallel,biomaRt,biomformat,biosigner,biotmle,BitSeq,blima,blimaTestingData,bnbc,BPRMeth,分歧点,BrowserViz,BrowserVizDemo,bsseq,BUMHMM,咖啡馆,CancerInSilico,萤石,红衣主教,CardinalWorkflows,催化剂,cbaf,ccrepe,cellbaseR,cellity,CellMapper,CellMapperData,cellTree,CexoR,ChemmineDrugs,ChemmineOB,ChemmineR,芝加哥,ChIPComp,chipenrich,chipenrich.data,ChIPexoQual,ChIPpeakAnno,ChIPQC,ChIPseeker,chromstaR,chromswitch,ClassifyR,cleanUpdTSeq,切肉刀,限幅器,clusterExperiment,clusterSeq,ClusterSignificance,cn,CNPBayes,彗星,compcodeR,承认,consensusSeekeR,contiBAIT,conumee,CopyhelpeR,文案,CoRegNet,COSMIC.67,cosmiq,CountClust,covRNA,cpvSNP,CRISPRseek,CrispRVariants,ctsGE,curatedBladderData,curatedCRCData,curatedMetagenomicData,curatedOvarianData,curatedTCGAData,CVE,cydar,dada2,dagLogo,DaMiRseq,DAPAR,DASC,DChIPRep,反编排,DEGreport,DelayedArray,DelayedMatrixStats,,derfinder,derfinderHelper,derfinderPlot,DESeq2,DEXSeq,DiffBind,diffuStats,不和谐的,DmelSGI,DNABarcodes,doppelgangR,Doscheda,剂量,DRIMSeq,dSimer,DSS,dupRadar,easyRNASeq,EBImage,EDASeq,EGSEA,eiR,埃尔默,ELMER.data,EmpiricalBrownsMethod,EnrichmentBrowser,ensembldb,EpiDISH,epivizr,epivizrChart,epivizrData,epivizrServer,epivizrStandalone,erma,EventPointer,ExperimentHub,ExperimentHubData,FamAgg,fCCAC,fCI,FindMyFriends,flowcatchR,flowMap,FlowSOM,fmcsR,FourCSeq,furrowSeg,GA4GHclient,GA4GHshiny,gcapc,genbankr,genefilter,GeneOverlap,geneplast,geneXtendeR,GenoGAM,GenomeInfoDb,GenomicAlignments,GenomicDataCommons,GenomicFeatures,GenomicFiles,GenomicInteractions,GenomicRanges,GenomicScores,GenomicTuples,genoset,GenVisR,GeuvadisTranscriptExpr,ggbio,Glimma,GMRP,GOexpress,GoogleGenomics,还装有,goSTAG,gQTLBase,gQTLstats,石墨,GreyListChIP,GRmetrics,groHMM,GSAR,GSE62944,GUIDEseq,Gviz,哈曼,HarmanData,HD2013SGI,HDF5Array,HelloRanges,HelloRangesData,Hiiragi2013,HiTC,hpar,HTSFilter,HumanAffyData,理想的,iGC,IHW,IHWpaper,illuminaio,imageHTS,ima,Imetagene,immunoClust,InPAS,检查,InteractionSet,InterMineR,电离,isomiRs,iva,JctSeqData,JunctionSeq,karyoploteR,Linnorm,Logolas,萝拉,LowMACA,lpsymphony,M3D,mAPKL,桅杆,MatrixRider,,MaxContrastProjection,工商管理硕士,mbt,MCbiclust,mdgsa,,MEDIPS,网格,墨西拿,MetaboSignal,metagene,metavizr,methimpute,methInheritSim,MethPed,MethylAid,MethylAidData,methylInheritance,MethylMix,methyvim,methyvimData,mfa,微生物组,mimager,minfi,minionSummaryData,米拉,miRcomp,miRmine,miRsponge,missMethyl,MMDiff2,这种款式,mogsa,MoonlightR,motifbreakR,motifStack,mpra,mQTL。核磁共振,MSnbase,MSnID,msPurity,msqc1,MSstats,MSstatsBioData,MultiAssayExperiment,multiMiR,MutationalPatterns,MWASTools,mygene,myvariant,mzR,NADfinder,NanoStringDiff,NanoStringQCPro,NarrowPeaks,ndexr,netbiov,nethet,netprioR,netReg,nondetects,normr,npGSEA,nucleoSim,益生元,omicade4,omicRexposome,OmicsMarkeR,奥纳西斯,OnassisJavaLibs,OncoScore,OncoSimulR,OperaMate,OPWeight,Organism.dplyr,Oscope,PAA,PANTHER.db,PanVizGenerator,parathyroidSE,pasilla,PasillaTranscriptExpr,Path2PPI,paxtoolsr,Pbase,pcaExplorer,PCAN,PCHiCdata,PGA,PGPC,phenopath,philr,phyloseq,π,Pigengene,plethy,Polyfit,pqsfinder,profileScoreDist,pRoloc,pRolocGUI,适当的,Prostar,ProteomicsAnnotationHubData,proteoQC,PSEA,PureCN,PWMEnrich,qcmetrics,QDNAseq,qpgraph,qsea,quantro,QuasR,R3CPET,,ramwas,Rcade,rcellminer,rcellminerData,rCGH,RCyjs,rDGIdb,ReactomePA,重新计票,收回,红色的,RefNet,地区,regsplice,ReQON,restfulSE,rexposome,RforProteomics,rfPred,RGraph2js,RGSEA,rhdf5,rhdf5client,Rhdf5lib,Rhtslib,RiboProfiling,riboSeqR,,RJMCMCNucleosomes,RNAprobR,rnaseqcomp,RnaSeqSampleSize,RnaSeqSampleSizeData,Rnits,的方式,ropls,rpx,rqt,Rsamtools,RTCGAToolbox,研制,RTNduals,RTNsurvival,RUVcorr,RUVSeq,旅游房车,samExploreR,sampleClassifier,sampleClassifierData,sangerseqR,sapFinder,,scDD,SCLCBam,SCnorm,司康饼,scoreInvHap,食物,scRNAseq,segmentSeq,seqCAT,seqPattern,seqplots,SeqSQC,SeqVarTools,SGSeq,shinyMethyl,ShortRead,SigCheck,SigFuge,similaRpeak,SIMLR,simulatorZ,sincell,Single.mTEC.Transcriptomes,SingleCellExperiment,SNPediaR,SNPhood,SNPhoodData,soGGi,sparseDOSSA,specL,SpidermiR,飞溅,分裂,SSPA,经验丰富的人,斯坦,StarBioTrek,STATegRa,statTarget,SummarizedExperiment,股东价值分析,SVAPLSseq,swfdr,switchde,synapter,systemPipeR,systemPipeRdata,TCGAbiolinks,TCGAbiolinksGUI,TFARM,TFBSTools,TFHAZ,tigre,TimerQuant,TMixClust,topdownr,泛太平洋伙伴关系,tracktables,trackViewer,transcriptogramer,transcriptR,tra利用,TRONCO,TurboNorm,TVTB,twoddpcr,variancePartition,VariantAnnotation,VariantFiltering,VariantToolsData,vsn,wavClusteR,XBSeq,xcms,山药,YAPSA,yriMulti,zebrafishRNASeq,zinbwave
构建报告

包档案

遵循bob 体育网址 在R会话中使用此包的说明。

源包 BiocStyle_2.6.1.tar.gz
Windows二进制 BiocStyle_2.6.1.zip
Mac OS X 10.11 (El Capitan) BiocStyle_2.6.1.tgz
源库 git克隆https://git.bioconductor.org/packages/BiocStyle
包短Url //www.anjoumacpherson.com/packages/BiocStyle/
软件包下载报告 下载数据
BioC 3.6的旧源包 源存档

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