## ----风格，echo = false，结果='Asis'-------------------------------------------------生物陶瓷::乳胶（）## ---- eval = false ---------------------------------------------------------------------------------------＃源（“https:////////////////////////////bioclite.r”）#bioclite（“maxcontrastprojection”）## --------------------------------------------------------------------------------------------------图书馆（MAXCONTRAST分解）库（EBIMAGE）数据（细胞）DIM（细胞）## --------------------------------------------------------------------------------------------------- max_contrast = contrastproight（imagestack = cells，w_x = 15，w_y = 15，shoothing = 5，blackshape =“box”）＃＃--------------------------------------------------------------------------------- Max_Contrast_large = ContrastProimpt（Imagestack = Cells [30:95，55：115，]，w_x = 15，w_y = 15，平滑= 5，blageShape =“box”）max_contrast_small =对比度重点（Imagestack =单元格[30:95,55：115，]，w_x = 3，w_y = 3，平滑= 5，刷子=“box”）##---- echo = false ---------------------------------------------------------------显示（MAX_CONTRAST_LARGE / MAX（单元格），方法=“光栅”）## ----echo = false -------------------------------------------------------------------------------显示（max_contrast_small / max（cells），方法=“栅格”）## ----------------------------------------------------------------------------------------------------- contrastStack = getContrastStack(imageStack = cells, w_x = 15, w_y = 15, brushShape = "box") indexMap = getIndexMap(contrastStack = contrastStack, smoothing = 5) max_contrast_fromMap = projection_fromMap(imageStack = cells, indexMap = indexMap) ## --------------------------------------------------------------------------------------- max_intensity_proj = intensityProjection(imageStack = cells, projType = "max") min_intensity_proj = intensityProjection(imageStack = cells, projType = "min") mean_intensity_proj = intensityProjection(imageStack = cells, projType = "mean") median_intensity_proj = intensityProjection(imageStack = cells, projType = "median") sd_intensity_proj = intensityProjection(imageStack = cells, projType = "sd") sum_intensity_proj = intensityProjection(imageStack = cells, projType = "sum") ## ----sessioninfo, results='asis'-------------------------------------------------------- toLatex(sessionInfo())