=====================修改了示例代码,以减少1.5.4版本的计算时间=====================在msviperCombinatorial中添加了参数processAll,允许对显示富集的对之间的协同性进行评估,其富集程度不会显著高于1.5.3版本的新规则===================== aREA算法的新实现,允许缺失值并加权表达式矩阵中每个数据点的贡献and new for version 1.5.2 ===================== New function aracne2regulon4cnv to parse ARACNe results generated by using different expression files for regulators and targets new for version 1.5.1 ===================== Bug fixed in aracne2regulon function new for version 1.3.2 ===================== Added function msviperClass ro generate instances of the msviper class new for version 1.3.1 ===================== Use of multiple cores based on the parallel package new for version 1.1.0 ===================== A bug in aracne2regulon function related to collapsing the regulons at the gene level was fixed A bug in the aecdf function was fixed Implemented a new pleiotropy algorithm aREA function was rewritten with improved performance Computation of empirical p-values was performed assuming a symmetric distribution of the ES around 0 for the NULL model, increasing in this way the power of the test by a factor of 2 A function to compute the similarity between VIPER signatures (viperSimilarity) was added to the package new for version 0.99.1 ====================== Bug fixed in shadow() function that was crashing when one regulon was completely contained into another regulon.