## try http:// if https:// URLs are not supported source("//www.anjoumacpherson.com/biocLite.R") biocLite("conumee")

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, seeconumee.

Enhanced copy-number variation analysis using Illumina 450k methylation arrays

Bioconductor version: 3.2

This package contains a set of processing and plotting methods for performing copy-number variation (CNV) analysis using Illumina 450k methylation arrays.

Author: Volker Hovestadt, Marc Zapatka

Maintainer: Volker Hovestadt

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported source("//www.anjoumacpherson.com/biocLite.R") biocLite("conumee")

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("conumee")

HTML		The conumee vignette
PDF		Reference Manual
Text		NEWS

Details

biocViews	CopyNumberVariation,DNAMethylation,MethylationArray,Microarray,Normalization,Preprocessing,QualityControl,Software
Version	1.2.0
In Bioconductor since	BioC 3.1 (R-3.2) (1 year)
License	GPL (>= 2)
Depends	R (>= 3.0),minfi,IlluminaHumanMethylation450kmanifest,IlluminaHumanMethylation450kanno.ilmn12.hg19
Imports	methods, stats,DNAcopy,rtracklayer,GenomicRanges,IRanges,GenomeInfoDb
LinkingTo
Suggests	BiocStyle,knitr,rmarkdown,minfiData,CopyNumber450kData,RCurl
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Followbob 体育网址 instructions to use this package in your R session.

Package Source	conumee_1.2.0.tar.gz
Windows Binary	conumee_1.2.0.zip
Mac OS X 10.6 (Snow Leopard)	conumee_1.2.0.tgz
Mac OS X 10.9 (Mavericks)	conumee_1.2.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/conumee/tree/release-3.2
Package Short Url	//www.anjoumacpherson.com/packages/conumee/
Package Downloads Report	Download Stats