To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("//www.anjoumacpherson.com/biocLite.R") biocLite("MiRaGE")
In most cases, you don't need to download the package archive at all.
This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, seeMiRaGE.
Bioconductor version: 3.2
The package contains functions for inferece of target gene regulation by miRNA, based on only target gene expression profile.
Author: Y-h. Taguchi
Maintainer: Y-h. Taguchi
Citation (from within R, entercitation("MiRaGE")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("//www.anjoumacpherson.com/biocLite.R") biocLite("MiRaGE")
查看文档的版本包age installed in your system, start R and enter:
browseVignettes("MiRaGE")
How to use MiRaGE Package | ||
Reference Manual |
biocViews | GeneExpression,Microarray,RNASeq,SAGE,Sequencing,Software |
Version | 1.12.0 |
In Bioconductor since | BioC 2.11 (R-2.15) (3.5 years) |
License | GPL |
Depends | R (>= 3.1.0),Biobase(>= 2.23.3) |
Imports | AnnotationDbi,BiocGenerics |
LinkingTo | |
Suggests | seqinr(>= 3.0.7),biomaRt(>= 2.19.1),GenomicFeatures(>= 1.15.4),Biostrings(>= 2.31.3),BSgenome.Hsapiens.UCSC.hg19,BSgenome.Mmusculus.UCSC.mm10,miRNATarget,humanStemCell,IRanges,GenomicRanges(>= 1.8.3),BSgenome,beadarrayExampleData |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Followbob 体育网址 instructions to use this package in your R session.
Package Source | MiRaGE_1.12.0.tar.gz |
Windows Binary | MiRaGE_1.12.0.zip |
Mac OS X 10.6 (Snow Leopard) | MiRaGE_1.12.0.tgz |
Mac OS X 10.9 (Mavericks) | MiRaGE_1.12.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/MiRaGE/tree/release-3.2 |
Package Short Url | //www.anjoumacpherson.com/packages/MiRaGE/ |
Package Downloads Report | Download Stats |
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