To install this package, start R and enter:

## try http:// if https:// URLs are not supported source("//www.anjoumacpherson.com/biocLite.R") biocLite("MiRaGE")

In most cases, you don't need to download the package archive at all.

MiRaGE

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, seeMiRaGE.

MiRNA Ranking by Gene Expression

Bioconductor version: 3.2

The package contains functions for inferece of target gene regulation by miRNA, based on only target gene expression profile.

Author: Y-h. Taguchi

Maintainer: Y-h. Taguchi

Citation (from within R, entercitation("MiRaGE")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported source("//www.anjoumacpherson.com/biocLite.R") biocLite("MiRaGE")

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("MiRaGE")

PDF How to use MiRaGE Package
PDF Reference Manual

Details

biocViews GeneExpression,Microarray,RNASeq,SAGE,Sequencing,Software
Version 1.12.0
In Bioconductor since BioC 2.11 (R-2.15) (3.5 years)
License GPL
Depends R (>= 3.1.0),Biobase(>= 2.23.3)
Imports AnnotationDbi,BiocGenerics
LinkingTo
Suggests seqinr(>= 3.0.7),biomaRt(>= 2.19.1),GenomicFeatures(>= 1.15.4),Biostrings(>= 2.31.3),BSgenome.Hsapiens.UCSC.hg19,BSgenome.Mmusculus.UCSC.mm10,miRNATarget,humanStemCell,IRanges,GenomicRanges(>= 1.8.3),BSgenome,beadarrayExampleData
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Followbob 体育网址 instructions to use this package in your R session.

Package Source MiRaGE_1.12.0.tar.gz
Windows Binary MiRaGE_1.12.0.zip
Mac OS X 10.6 (Snow Leopard) MiRaGE_1.12.0.tgz
Mac OS X 10.9 (Mavericks) MiRaGE_1.12.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/MiRaGE/tree/release-3.2
Package Short Url //www.anjoumacpherson.com/packages/MiRaGE/
Package Downloads Report Download Stats

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