| biocViews |
注释,DataImport,软件,可视化 |
| 版本 |
1.60.0 |
| Bioconductor自 |
BioC 2.2 (r - 2.7)(15年) |
| 许可证 |
艺术- 2.0 +文件许可证 |
| 取决于 |
R(> = 3.5.0)、方法GenomicRanges(> = 1.37.2) |
| 进口 |
XML (1.98 > = 0),BiocGenerics(> = 0.35.3),S4Vectors(> = 0.23.18),IRanges(> = 2.13.13),XVector(> = 0.19.7),GenomeInfoDb(> = 1.15.2),Biostrings(> = 2.47.6),zlibbiocRCurl (> = 1.4 - 2),Rsamtools(> = 1.31.2),GenomicAlignments(> = 1.15.6),BiocIO、工具、restfulr (> = 0.0.13) |
| 链接 |
S4Vectors,IRanges,XVector |
| 建议 |
BSgenome(> = 1.33.4),humanStemCell,微(> = 1.1.1),genefilter,limma,org.Hs.eg.db,hgu133plus2.db,GenomicFeatures,BSgenome.Hsapiens.UCSC.hg19,TxDb.Hsapiens.UCSC.hg19.knownGene,RUnit |
| SystemRequirements |
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| 增强了 |
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| URL |
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| 取决于我 |
BRGenomics,BSgenome,CAGEfightR,ChIPComp,CoverageView,CSSQ,腰带,EatonEtAlChIPseq,ExCluster,geneXtendeR,GenomicFiles,groHMM,吉他,HelloRanges,IdeoViz,liftOver,MethylSeekR,ORFhunteR,r3Cseq,测序,StructuralVariantAnnotation,svaNUMT,svaRetro |
| 进口我 |
AnnotationHubData,annotatr,APAlyzer,ASpediaFI,ATACseqQC,舞会礼服,BgeeCall,BindingSiteFinder,biscuiteer,BiSeq,分歧点,BSgenome,BSgenomeForge,篮球选手,卡斯珀,CexoR,ChIPanalyser,chipenrich,chipenrich.data,ChIPpeakAnno,ChIPseeker,ChromHeatMap,ChromSCape,chromswitch,circRNAprofiler,cliProfiler,cn,彗星,compartmap,consensusSeekeR,contiBAIT,conumee,crisprDesign,customProDB,dasper,位深蓝,derfinder,DEScan2,diffHic,diffUTR,DMCFB,DMCHMM,DMRcatedata,dmrseq,埃尔默,enhancerHomologSearch,enrichTF,ensembldb,EpiCompare,epidecodeR,epigraHMM,epimutacions,erma,esATAC,exomePeak2,extraChIPs,factR,fcScan,FindIT2,火焰,genbankr,geneAttribution,geneLenDataBase,GeneStructureTools,genomation,GenomicFeatures,GenomicInteractions,GenomicState,genotypeeval,ggbio,gmapR,gmoviz,哥特,GreyListChIP,Gviz,hiAnnotator,HiCDCPlus,HiTC,HTSeqGenie,icetea,igvR,检查,InTAD,IsoformSwitchAnalyzeR,karyoploteR,m6Aboost,MADSEQ,喜鹊,微波激射器,MEDIPS,metagene,metagene2,metaseqR2,methrix,methylKit,motifbreakR,MotifDb,multicrispr,MungeSumstats,NADfinder,nearBynding,NoRCE,normr,NxtIRFcore,NxtIRFdata,奥得河,食人魔,OMICsPCA,ORFik,过去的,periodicDNA,plyranges,婴儿车,primirTSS,proBAMr,profileplyr,PureCN,qsea,QuasR,美国广播公司,重新计票,recount3,收回,地区,REMP,Repitools,RGMQL,RiboProfiling,ribosomeProfilingQC,rifi,rifiComparative,RIPAT,RLSeq,rmspc,RNAmodR,咆哮,scanMiRApp,SCANVIS,scDblFinder,scPipe,scRNAseqApp,颈背,seqCAT,seqpac,seqsetvis,sevenC,SGSeq,shinyepico,签名者,SigsPack,SingscoreAMLMutations,sitadela,soGGi,spatialLIBD,SpliceWiz,srnadiff,syntenet,TFBSTools,trackViewer,transcriptR,一绺头发,tRNAscanImport,txcutr,VariantAnnotation,VariantTools,wavClusteR,wiggleplotr |
| 建议我 |
高山,AnnotationHub,自治,BiocFileCache,biovizBase,bsseq,chipseqDB,西塞罗,CINdex,compEpiTools,CrispRVariants,crisprViz,DAMEfinder,DiffBind,eisaR,epistack,EpiTxDb.Hs.hg38,EpiTxDb.Sc.sacCer3,epivizrChart,epivizrData,excluderanges,FDb.FANTOM4.promoters.hg19,fourDNData,geneXtendeR,GenomicAlignments,GenomicDistributions,GenomicInteractionNodes,GenomicRanges,GeuvadisTranscriptExpr,goseq,gwascat,HiCExperiment,HiContacts,InPAS,interactiveDisplay,megadepth,methylumi,miRBaseConverter,MutationalPatterns,NanoMethViz,纳米管,OrganismDbi,PasillaTranscriptExpr,π,图片,平,pipeFrame,plotgardener,pqsfinder,ProteoDisco,R453Plus1Toolbox,RcisTarget,rGADEM,林格,RNAmodR.AlkAnilineSeq,RNAmodR.ML,RNAmodR.RiboMethSeq,RnBeads,RSVSim,similaRpeak,systemPipeR,systemPipeRdata,TAPseq,TCGAutils,三层,tRNAdbImport,TVTB,xcore |
| 我的链接 |
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| 构建报告 |
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