版本变化0.99.31——添加额外的过滤粗俗的数据(多个物种)的混合物。版本0.99.30 -添加阈值变化的数量最高的基因,用于测试步骤。这避免了大量的假阳性超高空间数据集,例如10 x粗俗的数据。版本变化0.99.29——稀疏矩阵计算皮尔逊相关的更新功能。新功能更准确。的变化版本0.99.25 - R依赖回到4.0.0改变。版本变化0.99.24 -删除《天方夜谭》中加快构建直接下载文件。——改变了R依赖性,这样包可以建在老R版本。——改变了小插图标题匹配的引用。版本变化0.99.23——小编辑README。md Changes in version 0.99.22 - Received comments from Bioconductor reviewer. - Moved BiocStyle from Imports: to Suggests:. - Modified vignettes. Deleted GitHub installation instruction. - Changed default value of Ncores to be 2. - Changed output of CB2FindCell to be an SummarizedExperiment object. Changed GetCellMat accordingly. Changed examples and testthat accordingly. Changes in version 0.99.21 - Updated testthat scripts. - Minor bug fix in Read10xRaw.R. Added as.numeric when building sparse matrix. Changes in version 0.99.20 - Updated citation. Changes in version 0.99.19 - Minor edits on package vignettes. Changes in version 0.99.18 - Minor bug fix. - Minor edits on package vignettes. Changes in version 0.99.17 - Initial version preparing to submit to Bioconductor. Changes in version 0.99.16 - Change function name Read10X to be Read10xRaw, Read10Xh5 to be Read10xRawH5. - Change parameter name PrintProg to be verbose. - Minor edits on parameter description of function GetCellMat. - Added a quick function QuickCB2 by combining all necessary functions into one. Input: directory of raw data. Output: filtered matrix, or a Seurat object containing filtered matrix. Changes in version 0.99.15 - When dividing barcodes into groups with similar barcode counts, the last group will be combined with second last group if the number of barcodes in the last group is less than half of that in the second last group. Changes in version 0.99.14 - Change parameter names to match those in the paper: retain -> upper. background -> lower. Changes in version 0.99.13 - Rounded baseline threshold. - Minor changes on vignette. - Bug fix when retain threshold is larger than any barcode. Changes in version 0.99.12 - Minor changes on vignette. - Baseline (2 * background) clustering threshold will be printed out. Changes in version 0.99.11 - Customized knee point calculation function. - CB2FindCell will print out retain threshold in standard output. - Minor bug fixes when there is no cluster. Changes in version 0.99.0 - Created initial github page. - Created package. - Created vignettes. - Checked package... passed R CMD check and BiocCheck. - Ready to submit to Bioconductor.