| biocViews |
注释,报道,遗传学,GenomeAnnotation,基础设施,测序,软件 |
| 版本 |
1.24.0 |
| Bioconductor自 |
BioC 3.2 (r - 3.2)(6.5年) |
| 许可证 |
艺术- 2.0 |
| 取决于 |
R(> = 4.0.0)、方法MatrixGenerics(> = 1.1.3),GenomicRanges(> = 1.41.5),Biobase |
| 进口 |
跑龙套、统计数据、工具,矩阵,BiocGenerics(> = 0.37.0),S4Vectors(> = 0.27.12),IRanges(> = 2.23.9),GenomeInfoDb(> = 1.13.1),DelayedArray(> = 0.15.10) |
| 链接 |
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| 建议 |
HDF5Array(> = 1.7.5),注释,AnnotationDbi,hgu95av2.db,GenomicFeatures,TxDb.Hsapiens.UCSC.hg19.knownGene,jsonlite,rhdf5,气道,BiocStyle,knitr,rmarkdown,RUnit,testthat,消化 |
| SystemRequirements |
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| 增强了 |
|
| URL |
//www.anjoumacpherson.com/packages/SummarizedExperiment |
| BugReports |
https://github.com/Bioconductor/SummarizedExperiment/issues |
| 取决于我 |
AffiXcan,气道,AllelicImbalance,ASpediaFI,atena,bambu,BDMMAcorrect,benchmarkfdrData2019,BiocSklearn,BioPlex,BiSeq,bnbc,bodymapRat,BrainSABER,bsseq,CAGEfightR,celaref,celldex,clusterExperiment,compartmap,CoreGx,coseq,csaw,CSSQ,ctgGEM,curatedAdipoChIP,curatedAdipoRNA,curatedMetagenomicData,DaMiRseq,德科,deepSNV,DeMixT,DESeq2,DEXSeq,DiffBind,diffcoexp,diffHic,散度,DMCFB,DMCHMM,DREAM4,ENmix,EnrichmentBrowser,epigenomix,evaluomeR,EventPointer,exomePeak2,ExperimentSubset,ExpressionAtlas,盛宴,裂变,FlowSorted.Blood.EPIC,FlowSorted.CordBloodCombined.450k,弗雷泽,GenoGAM,GenomicAlignments,GenomicFiles,GenomicSuperSignature,GRmetrics,GSEABenchmarkeR,HDCytoData,HelloRanges,HighlyReplicatedRNASeq,hipathia,HMP16SData,IgGeneUsage,InTAD,InteractionSet,感兴趣,iSEE,isomiRs,ivygapSE,lefser,lipidr,LoomExperiment,made4,MatrixQCvis,工商管理硕士,MetaGxOvarian,MetaGxPancreas,methrix,methylPipe,MethylSeqData,MetNet,米娅,miaSim,miaViz,microbiomeDataSets,microRNAome,minfi,miRmine,moanin,MouseGastrulationData,MouseThymusAgeing,mpra,MultiAssayExperiment,NADfinder,NBAMSeq,NewWave,ObMiTi,先驱者,莲花,pairkat,parathyroidSE,PDATK,PhIPData,profileplyr,重新计票,recount3,RegEnrich,REMP,restfulSE,restfulSEData,ROCpAI,rqt,runibic,sampleClassifierData,Scale4C,scAnnotatR,scClassifR,scGPS,司康饼,scTreeViz,SDAMS,SeqGate,SGSeq,signatureSearch,SingleCellExperiment,singleCellTK,单,soGGi,spatialDmelxsim,spqn,spqnData,sRACIPE,ssPATHS,经验丰富的人,SummarizedBenchmark,survtype,tidySummarizedExperiment,timecoursedata,TimeSeriesExperiment,TissueEnrich,TNBC.CMS,肺结核,UMI4Cats,VanillaICE,VariantAnnotation,VariantExperiment,伶盗龙,weitrix,山药,zinbwave |
| 进口我 |
亚当,ADImpute,aggregateBioVar,airpart,ALDEx2,高山,AlpsNMR,微生物,anota2seq,APAlyzer,apeglm,appreci8R,亚瑟士,AUCell,自治,awst,barcodetrackR,基础知识,后面;,BayesSpace,bayNorm,BBCAnalyzer,benchdamic,bigPint,BiocOncoTK,BioNERO,biotmle,biovizBase,biscuiteer,BiSeq,blacksheepr,BloodCancerMultiOmics2017,BloodGen3Module,brgedata,BRGenomics,BUMHMM,BUScorrect,BUSseq,卡昂,篮球选手,催化剂,cBioPortalData,ccfindR,celda,CelliD,CellMixS,CellTrails,censcyt,Cepo,CeTF,印度豹,ChIPpeakAnno,ChromSCape,chromVAR,CiteFuse,CLLmethylation,clustifyr,cmapR,CNVfilteR,CNVRanger,coexnet,CoGAPS,结合,conclus,调味品,consensusDE,CopyNumberPlots,科拉尔,COSMIC.67,countsimQC,crossmeta,curatedTCGAData,cydar,CyTOFpower,cytoKernel,cytomapper,DAMEfinder,dasper,debCAM,debrowser,DEComplexDisease,decompTumor2Sig,反编排,DEGreport,deltaCaptureC,部,DEScan2,命运,DEWSeq,diffcyt,diffUTR,恐龙,DiscoRhythm,截然不同的,dittoSeq,DMRcate,DominoEffect,doppelgangR,定量给料器,DropletUtils,沙丘,easierData,easyRNASeq,eisaR,埃尔默,emtdata,ensemblVEP,epialleleR,epigraHMM,epivizrData,erma,EWCE,ExpHunterSuite,FCBF,fcScan,FieldEffectCrc,FindIT2,鱼池,火焰,fluentGenomics,空对空导弹,gCrisprTools,GeneTonic,GenomicDataCommons,genomicInstability,getDEE2,ggbio,ggspavis,Glimma,glmGamPoi,glmSparseNet,GNET2,gramm4R,GreyListChIP,gscreend,GSE13015,GSVA,gwasurvivr,GWENA,HMP2Data,HTSeqGenie,HumanTranscriptomeCompendium,蜂鸟,iasva,icetea,理想的,IHWpaper,ILoReg,imcRtools,infercnv,检查,InterMineR,iSEEu,iteremoval,花边,LineagePulse,lionessR,MADSEQ,梅,马尔,桅杆,mbkmeans,MBQN,mCSEA,餐,肉,MEB,metabolomicsWorkbenchR,MetaGxBreast,MetaNeighbor,metaseqR2,MethReg,MethylAid,methylscaper,methylumi,MicrobiotaProcess,midasHLA,miloR,MinimumDistance,miRLAB,miRSM,missMethyl,MLSeq,蒙娜丽莎,MoonlightR,motifbreakR,motifmatchr,MPRAnalyze,MsFeatures,msgbsR,MSPrep,msqrob2,MultiDataSet,multiOmicsViz,mumosa,马斯喀特,musicatk,MWASTools,NanoMethViz,Nebulosa,netSmooth,NoRCE,NormalyzerDE,NxtIRFcore,oligoClasses,omicRexposome,OmicsLonDA,omicsPrint,oncomix,ORFik,OVESEG,PAIRADISE,pcaExplorer,peco,PharmacoGx,phemd,phenopath,PhosR,pipeComp,pmp,POWSC,高伦雅芙,proDA,psichomics,pulsedSilac,PureCN,QFeatures,qsmooth,quantiseqr,R453Plus1Toolbox,RadioGx,RaggedExperiment,RareVariantVis,RcisTarget,receptLoss,regionReport,regsplice,rgsepd,Rmmquant,RNAAgeCalc,RNAsense,咆哮,rScudo,RTCGAToolbox,研制,土星,SBGNview,SC3,SCArray,嘘,scBFA,scCB2,scDblFinder,scDD,scds,散粒,scmap,scMerge,scmeth,SCnorm,scoreInvHap,scp,scPipe,食物,scReClassify,scRepertoire,scRNAseq,颈背,用水晶球占卜,scTensor,scTGIF,天窗,sechm,裂殖体,seqCAT,芝麻,SEtools,sigFeature,SigsPack,SingleCellMultiModal,singscore,SingscoreAMLMutations,激流回旋,弹弓,紧身的,snapcount,SNPhood,猎犬,SpatialCPie,spatialDE,SpatialExperiment,spatialHeatmap,spatialLIBD,spatzie,飞溅,SplicingFactory,srnadiff,结构体,StructuralVariantAnnotation,supersigs,switchde,systemPipeR,systemPipeTools,TabulaMurisSenisData,TBSignatureProfiler,TCGAbiolinks,TCGAbiolinksGUI,TCGAutils,TCGAWorkflow,TCGAWorkflowData,TCseq,tenXplore,tidybulk,tidySingleCellExperiment,烤面包,但在,ToxicoGx,tradeSeq,TrajectoryUtils,transformGamPoi,TraRe,traviz,TreeSummarizedExperiment,时尚的,三轮车,TSCAN,tscR,TSRchitect,TTMap,TVTB,tximeta,VAExprs,VariantFiltering,vidger,个字,xcms,zellkonverter,zFPKM |
| 建议我 |
AnnotationHub,biobroom,BiocPkgTools,biotmleData,cageminer,CAGEWorkflow,curatedAdipoArray,curatedTBData,dcanr,dce,dearseq,解耦,DelayedArray,多萝西娅,DuoClustering2018,更容易,刨边机,EnMCB,epivizr,epivizrChart,esetVis,fobitools,GENIE3,GenomicRanges,globalSeq,GSE103322,gsean,杂环胺,HDF5Array,HPiP,Informeasure,InteractiveComplexHeatmap,interactiveDisplay,MatrixGenerics,mistyR,MOFA2,MSnbase,奥得河,pathwayPCA,philr,podkat,PubScore,RforProteomics,RiboProfiling,S4Vectors,SBGNview.data,scFeatureFilter,semisup,麻雀,svaNUMT,svaRetro,systemPipeShiny,TFutils,tissueTreg |
| 我的链接 |
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| 构建报告 |
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