| biocViews |
DataRepresentation,基础设施,软件 |
| 版本 |
2.28.0 |
| Bioconductor自 |
BioC 2.3 (r - 2.8)(13.5年) |
| 许可证 |
艺术- 2.0 |
| 取决于 |
R(> = 4.0.0)、方法、效用,统计数据,BiocGenerics(> = 0.39.2),S4Vectors(> = 0.29.19) |
| 进口 |
stats4 |
| 链接 |
S4Vectors |
| 建议 |
XVector,GenomicRanges,Rsamtools,GenomicAlignments,GenomicFeatures,BSgenome.Celegans.UCSC.ce2,pasillaBamSubset,RUnit,BiocStyle |
| SystemRequirements |
|
| 增强了 |
|
| URL |
//www.anjoumacpherson.com/packages/IRanges |
| BugReports |
https://github.com/Bioconductor/IRanges/issues |
| 取决于我 |
AnnotationDbi,AnnotationHubData,BaalChIP,bambu,biomvRCNS,Biostrings,BiSeq,BSgenome,BubbleTree,bumphunter,咖啡馆,卡斯珀,CexoR,chimeraviz,ChIPComp,ChIPpeakAnno,chipseq,食典委,consensusSeekeR,CSAR,CSSQ,customProDB,deepSNV,DelayedArray,DESeq2,DEXSeq,DirichletMultinomial,DMCFB,DMCHMM,DMRcaller,epigenomix,epihet,ExCluster,exomeCopy,fCCAC,geneRxCluster,GenomeInfoDb,GenomicAlignments,GenomicDistributions,GenomicFeatures,GenomicRanges,groHMM,gtrellis,Gviz,harbChIP,HelloRanges,HiTC,IdeoViz,InTAD,LiebermanAidenHiC2009,MotifDb,NADfinder,ORFik,OTUbase,pd.ag,pd.aragene.1.0.st,pd.aragene.1.1.st,pd.ath1.121501,pd.barley1,pd.bovgene.1.0.st,pd.bovgene.1.1.st,pd.bovine,pd.bsubtilis,pd.cangene.1.0.st,pd.cangene.1.1.st,pd.canine,pd.canine.2,pd.celegans,pd.chicken,pd.chigene.1.0.st,pd.chigene.1.1.st,pd.chogene.2.0.st,pd.chogene.2.1.st,pd.citrus,pd.clariom.d.human,pd.clariom.s.human,pd.clariom.s.human.ht,pd.clariom.s.mouse,pd.clariom.s.mouse.ht,pd.clariom.s.rat,pd.clariom.s.rat.ht,pd.cotton,pd.cyngene.1.0.st,pd.cyngene.1.1.st,pd.cyrgene.1.0.st,pd.cyrgene.1.1.st,pd.cytogenetics.array,pd.drogene.1.0.st,pd.drogene.1.1.st,pd.drosgenome1,pd.drosophila.2,pd.e.coli.2,pd.ecoli,pd.ecoli.asv2,pd.elegene.1.0.st,pd.elegene.1.1.st,pd.equgene.1.0.st,pd.equgene.1.1.st,pd.felgene.1.0.st,pd.felgene.1.1.st,pd.fingene.1.0.st,pd.fingene.1.1.st,pd.genomewidesnp.5,pd.genomewidesnp.6,pd.guigene.1.0.st,pd.guigene.1.1.st,pd.hc.g110,pd.hg.focus,pd.hg.u133.plus.2,pd.hg.u133a,pd.hg.u133a.2,pd.hg.u133a.tag,pd.hg.u133b,pd.hg.u219,pd.hg.u95a,pd.hg.u95av2,pd.hg.u95b,pd.hg.u95c,pd.hg.u95d,pd.hg.u95e,pd.hg18.60mer.expr,pd.ht.hg.u133.plus.pm,pd.ht.hg.u133a,pd.ht.mg.430a,pd.hta.2.0,pd.hu6800,pd.huex.1.0.st.v2,pd.hugene.1.0.st.v1,pd.hugene.1.1.st.v1,pd.hugene.2.0.st,pd.hugene.2.1.st,pd.maize,pd.mapping250k.nsp,pd.mapping250k.sty,pd.mapping50k.hind240,pd.mapping50k.xba240,pd.margene.1.0.st,pd.margene.1.1.st,pd.medgene.1.0.st,pd.medgene.1.1.st,pd.medicago,pd.mg.u74a,pd.mg.u74av2,pd.mg.u74b,pd.mg.u74bv2,pd.mg.u74c,pd.mg.u74cv2,pd.mirna.1.0,pd.mirna.2.0,pd.mirna.3.0,pd.mirna.4.0,pd.moe430a,pd.moe430b,pd.moex.1.0.st.v1,pd.mogene.1.0.st.v1,pd.mogene.1.1.st.v1,pd.mogene.2.0.st,pd.mogene.2.1.st,pd.mouse430.2,pd.mouse430a.2,pd.mta.1.0,pd.mu11ksuba,pd.mu11ksubb,pd.nugo.hs1a520180,pd.nugo.mm1a520177,pd.ovigene.1.0.st,pd.ovigene.1.1.st,pd.pae.g1a,pd.plasmodium.anopheles,pd.poplar,pd.porcine,pd.porgene.1.0.st,pd.porgene.1.1.st,pd.rabgene.1.0.st,pd.rabgene.1.1.st,pd.rae230a,pd.rae230b,pd.raex.1.0.st.v1,pd.ragene.1.0.st.v1,pd.ragene.1.1.st.v1,pd.ragene.2.0.st,pd.ragene.2.1.st,pd.rat230.2,pd.rcngene.1.0.st,pd.rcngene.1.1.st,pd.rg.u34a,pd.rg.u34b,pd.rg.u34c,pd.rhegene.1.0.st,pd.rhegene.1.1.st,pd.rhesus,pd.rice,pd.rjpgene.1.0.st,pd.rjpgene.1.1.st,pd.rn.u34,pd.rta.1.0,pd.rusgene.1.0.st,pd.rusgene.1.1.st,pd.s.aureus,pd.soybean,pd.soygene.1.0.st,pd.soygene.1.1.st,pd.sugar.cane,pd.tomato,pd.u133.x3p,pd.vitis.vinifera,pd.wheat,pd.x.laevis.2,pd.x.tropicalis,pd.xenopus.laevis,pd.yeast.2,pd.yg.s98,pd.zebgene.1.0.st,pd.zebgene.1.1.st,pd.zebrafish,pepStat,periodicDNA,plyranges,proBAMr,PSICQUIC,RepViz,rfPred,rGADEM,rGREAT,RJMCMCNucleosomes,RNAmodR,Scale4C,范围,SGSeq,SICtools,SNPlocs.Hsapiens.dbSNP.20101109,SNPlocs.Hsapiens.dbSNP.20120608,SNPlocs.Hsapiens.dbSNP141.GRCh38,SNPlocs.Hsapiens.dbSNP142.GRCh37,Structstrings,TEQC,tra利用,三层,VariantTools,VplotR,XtraSNPlocs.Hsapiens.dbSNP141.GRCh38,XVector |
| 进口我 |
ALDEx2,AllelicImbalance,高山,amplican,AneuFinder,annmap,annotatr,appreci8R,ArrayExpressHTS,ASpediaFI,ASpli,AssessORF,ATACseqQC,atena,舞会礼服,bamsignals,BasicSTARRseq,BBCAnalyzer,beadarray,BiocOncoTK,biovizBase,BiSeq,BitSeq,bnbc,BPRMeth,分歧点,breakpointR,BRGenomics,BSgenome,bsseq,BUMHMM,BumpyMatrix,BUSpaRse,CAGEfightR,cageminer,篮球选手,cBioPortalData,别致的,ChIPanalyser,chipenrich,chipenrich.data,ChIPexoQual,ChIPQC,ChIPseeker,chipseq,ChIPseqR,ChIPsim,ChromHeatMap,ChromSCape,chromstaR,chromswitch,chromVAR,西塞罗,CINdex,circRNAprofiler,cleanUpdTSeq,切肉刀,cn.mops,cn,CNVfilteR,CNVPanelizer,CNVRanger,CNVrd2,可可,彗星,compEpiTools,ComplexHeatmap,contiBAIT,conumee,copynumber,CopyNumberPlots,文案,CoverageView,CRISPRseek,CrispRVariants,csaw,dada2,DAMEfinder,dasper,debrowser,解读,deconvR,DegNorm,DelayedMatrixStats,deltaCaptureC,derfinder,derfinderHelper,derfinderPlot,DEScan2,DiffBind,diffHic,diffloop,diffUTR,DMRcate,DMRScan,dmrseq,DominoEffect,dpeak,DRIMSeq,DropletUtils,dStruct,easyRNASeq,EDASeq,eisaR,埃尔默,enhancerHomologSearch,ENmix,EnrichedHeatmap,enrichTF,ensembldb,epidecodeR,epigraHMM,epistack,EpiTxDb,epivizr,epivizrData,erma,esATAC,EventPointer,exomePeak2,FastqCleaner,fastseg,fcScan,FilterFFPE,FindIT2,FindMyFriends,fitCons.UCSC.hg19,弗雷泽,GA4GHclient,gcapc,genbankr,geneAttribution,GeneGeneInteR,《创世纪》,GeneStructureTools,GenoGAM,genomation,genomeIntervals,GenomicAlignments,GenomicDataCommons,GenomicFiles,GenomicInteractions,GenomicOZone,GenomicScores,GenomicState,GenomicTuples,genotypeeval,GenVisR,ggbio,girafe,gmapR,gmoviz,GOfuncR,还装有,哥特,gpart软件,GSVA,GUIDEseq,gwascat,h5vc,HDF5Array,的热图,HiCBricks,HiCcompare,HiCDCPlus,HilbertCurve,HTSeqGenie,蜂鸟,icetea,理想的,idr2d,ima,InPAS,检查,intansv,InteractionSet,InteractiveComplexHeatmap,感兴趣,InterMineR,ipdDb,iSEEu,IsoformSwitchAnalyzeR,isomiRs,iva,IWTomics,karyoploteR,leeBamViews,萝拉,m6Aboost,MACPET,MADSEQ,MafDb.1Kgenomes.phase1.GRCh38,MafDb.1Kgenomes.phase1.hs37d5,MafDb.1Kgenomes.phase3.GRCh38,MafDb.1Kgenomes.phase3.hs37d5,MafDb.ExAC.r1.0.GRCh38,MafDb.ExAC.r1.0.hs37d5,MafDb.ExAC.r1.0.nonTCGA.GRCh38,MafDb.ExAC.r1.0.nonTCGA.hs37d5,MafDb.gnomAD.r2.1.GRCh38,MafDb.gnomAD.r2.1.hs37d5,MafDb.gnomADex.r2.1.GRCh38,MafDb.gnomADex.r2.1.hs37d5,MafDb.TOPMed.freeze5.hg19,MafDb.TOPMed.freeze5.hg38,MafH5.gnomAD.v3.1.1.GRCh38,微波激射器,MatrixRider,mCSEA,联合化疗,餐,MEDIPS,MesKit,metagene,metagene2,metaseqR2,MethCP,methimpute,methInheritSim,MethReg,methrix,methylCC,methylInheritance,methylKit,methylPipe,MethylSeekR,MethylSeqData,methylSig,methylumi,米娅,microbiomeMarker,minfi,MinimumDistance,米拉,missMethyl,MMAPPR2,Modstrings |
