# # # R代码从装饰图案的mygene来源。Rnw“# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块1号:style-Sweave # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # BiocStyle::乳胶()# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块2号:mygene。Rnw: 32-33 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #库(mygene) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块3号:mygene。Rnw: 36-42 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #基因<——getGene(“1017”,字段=“所有”)长度(基因)基因(“名字”)(“taxid”)基因(“uniprot”) (“refseq”) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块数量4:mygene。情况下Rnw:满足52 - 53 #需求# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # getGenes (c (“1017”、“1018”、“ENSG00000148795”)) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块5号:mygene。Rnw: 67 - 68 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #查询(q =“cdk2”,大小= 5)# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块6号:mygene。Rnw: 71 - 72 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #查询(q =“NM_013993”) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块7号:mygene。Rnw: 82 - 84 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # queryMany (c (1053 _at’,‘117 _at’,‘121 _at’,‘1255 _g_at’,‘1294 _at’),范围=“记者”,物种=“人”)# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块8号:mygene。Rnw: 90 - 101 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # xli < - c (‘CCDC83’,‘MAST3’,‘RPL11’,‘ZDHHC20’,‘LUC7L3’,‘SNORD49A’,‘CTSH’,‘ACOT8’) txdb <——makeTxDbFromMyGene (xli范围=“象征”,物种=“人”)成绩单(txdb) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块9号:mygene。Rnw: 116 - 126 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # xli < - c (‘DDX26B’,‘CCDC83’,‘MAST3’,‘FLOT1’,‘RPL11’,‘ZDHHC20’,‘LUC7L3’,‘SNORD49A’,‘CTSH’,‘ACOT8’) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块10号:mygene。Rnw: 131 - 132 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # queryMany (xli范围=“标志”字段=“entrezgene物种=“人”)# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块11号:mygene。Rnw: 139 - 142 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #了< queryMany (xli范围=“象征”字段= "运用。基因”,人类物种= " ")出运用美元[[4]]美元基因# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块12号:mygene。Rnw: 150 - 157 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # xli < - c (‘DDX26B’,‘CCDC83’,‘MAST3’,‘FLOT1’,‘RPL11’,‘Gm10494’) queryMany (xli范围=“象征”字段=“entrezgene物种=“人”)# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块13号:mygene。Rnw: 162 - 171 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # xli < - c (‘DDX26B’,‘CCDC83’,‘MAST3’,‘FLOT1’,‘RPL11’,‘Gm10494’,‘1007 _s_at’,‘AK125780’) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块14号:mygene。Rnw: 176 - 180 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #了< - queryMany (xli范围= c(“象征”、“记者”,“入世”),字段= c (“entrezgene”、“uniprot”),物种=“人”)uniprot.Swiss美元了。普罗特[[5]]# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块数量15:mygene。Rnw: 191 - 193 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # queryMany (xli范围= c(“象征”、“记者”,“入世”),字段= c (“entrezgene”、“uniprot”),物种=‘人类’,returnall = TRUE)