0.1.0(01-09-2017)+代码测试和稳定。准备提交Bioconductor一旦装饰图案(以及其他需求)完成。0.2.0(01-18-2017)+小插图完成测试0.99.0(01-20-2017)+包(版本0.99.0)提交Bioconductor审查0.99.2(02-24-2017)+修订包(版本0.99.2)提交Bioconductor进一步审查0.99.2(04-18-2017)+修订包(版本0.99.2)提交Bioconductor审查1.0.0(04-19-2017)+包在Bioconductor接受(版本1.0.0),包含在3.5版本。1.2.0(09-26-2017)+支持添加est序列的分析/互补;床上文件现在可以提供作为输入(1.2.0版)1.2.1(10-17-2017)+小文档的变化,以更好地反映在v . 1.2更新版本(1.2.1)。1.8.0(07-10-2018)+额外的启动子(TSR)度量添加到输出,包括修改形状指数(mSI)和扭矩。+修改列id反映更新的术语。+更新用户指南除了创建跨平台的奇点reproucible食谱分析。1.8.9(10-08-2018)+正确的更新速度分析数据对齐时遇到的问题与许多支架总成。+简化一个装饰图案的一部分。 1.10.12 (09-17-2019) + Updates to include 3'-read capturing from bam input files and data structures to allow ignoring spurious TSSs. + Added capabilities for sorting by strand (and seq/TSS) for TSS merging. + Made a change leading to a substantial speed-up of mergeSampleData(). + Added qname to saved columns from .bam input. + Minor changes to writeTSR() and writeTSS(). + Rewrite to mergeSampleData). + Improvements to loadTSSobj(). + Necessary updates to the Singularity recipe to reflect the above changes. 1.13.1 (10-31-2019) + Version bump due to release of Bioconductor v. 3.10. 1.13.2 (11-01-2019) + Corrected minor bugs in non-user-level functions detTSR() and detTSS() + Various updates to Show-methods.R 1.13.3 (11-21-2019) + Updated documentation for loadTSSobj() for the sake of clarity. 1.13.4 (12-16-2019) + Added feature to writeTSS() that generates two separate bedgraph files (plus and minus) instead of one. 1.13.5 (3-30-2020) + Corrected line in loadTSSobj() that caused a build error in the Bioc devel branch (3.11).