版本1.3.8 -重命名文件的代码的变化。(2021-03-23,星期二)——为ggbartaxa和ggdiffbartaxa添加别名。(2021-03-23,星期二)的变化版本1.3.7——优化进口安装。(2021-03-15,Mon)——添加sampleLevels ggbartax调整轴标签的顺序。星期五(2021-03-12)——更新import_qiime2避免错误时只提供功能表。(2021-02-26,星期五)变化1.3.6版- svg开发转换为pdf dev。(2021-02-04,清华)的变化版本ggrarecurve 1.3.5 -修复一个错误的例子。(2021-01-07,星期四)factorNames =“集团”factorNames =“集团”的变化版本1.3.4 -修复一个错误数字样本的名字。(2020-11-26,星期四)——geom_tiplab也支持循环布局,所以删除geom_tiplab2。(2020-11-26,星期四)v1.3.3——增加的变化。treedata taxonomyTable类。(我2020-11-23)的变化版本1.3.2 - ggrarecurve可以设置颜色为每个样本的变量组。 (2020-11-11, Tue) - using shadow=FALSE and providing factorNames - https://github.com/YuLab-SMU/MicrobiotaProcess/issues/21 - add get_rarecurve to avoid repeated calculation when displaying rare curve. (2020-11-17, Tue) - rareres <- get_rarecurve(obj, chunks=400) p <- ggrarecurve(rareres) Changes in version 1.3.1 - ggordpoint add showsample to show the labels of sample. (2020-10-29, Thu) - the point of ggordpoint use the points of ggstar. (2020-10-30, Fri) - to obtain the dynamic arguments of diff_analysis, the call was changed to someparams. someparams contained the arguments used in other functions. (2020-11-09, Mon) - https://github.com/YuLab-SMU/MicrobiotaProcess/issues/20 Changes in version 1.2.0 - Bioconductor 3.12 release (2020-10-28, Wed) Changes in version 1.1.13 - removed retrieve_seq and mapply_retrieve_seq function, since these need internet. Which might cause time out when check. (2020-10-16, Fri) Changes in version 1.1.12 - modified a bug in diff_analysis.phyloseq: change tax_table(ps) to ps@tax_table to avoid generate error when tax_table is NULL. (2020-10-15, Thu) Changes in version 1.1.11 - update the examples of drop_taxa. (2020-10-14, Wed) Changes in version 1.1.10 - update ggdiffclade to support data.frame input when reduce is TRUE. (2020-08-28, Fri) Changes in version 1.1.9 - update ggordpoint to fit the usage when user want to set mapping by manually. (2020-08-25, Tue) Changes in version 1.1.8 - get_taxadf, get_alltaxadf and diff_analysis has supported function datasets or other type datasets. (2020-08-17, Mon) Changes in version 1.1.7 - bugfix: cladetext argument has been omitted in ggdiffclade, now it has been fixed. (2020-08-14, Fri) - deprecated argument: the size argument controlled the width of line of tree has been deprecated. The linewd replace it (2020-08-14, Fri). Changes in version 1.1.6 - removeUnkown argument has been replaced with removeUnknown in ggdiffbox, ggeffectsize, ggdifftaxbar and ggdiffclade. (2020-08-12, Wed) - class argument has been replaced with classgroup in diff_analysis. (2020-08-12, Wed) - add inward_circular layout in ggdiffclade. (2020-08-12, Wed) Changes in version 1.1.5 - ggdifftaxbar supports png, tiff format. (2020-08-10, Mon) - add stop information to state the class argument in diff_analysis. (2020-08-10, Mon) Changes in version 1.1.4 - add tax_table information to result of get_taxadf. (2020-08-07, Fri) Changes in version 1.1.3 - change according to dplyr (v=1.0.0) (2020-08-05, Wed) - remove rename_ and group_by_ - modified the angle to 90 in ggdiffclade when layout is slanted or rectangular (2020-08-05, Wed) Changes in version 1.1.2 - fix a bug. When the first rank taxa level (Kingdom) is NA. Changes in version 0.99.1 (2020-03-03) - First release of Bioconductor Changes in version 0.99.0 (2019-08-14) - Submitted to Bioconductor