版本2.8.0的更改--------------------------------------------新功能o新功能getListGif被添加到与ListGif Web服务器(http://listgif.nubic)交互.northwestern.edu)。ListGif提供了一种快速分析解决方案,可以从查询基因列表中识别代表过多的生物医学概念。结果被呈现为单词。错误修复了o Reactome超链接已修复。版本2.0.0的更改--------------------------新功能o Reactome途径分析基于local reactome.db。以前的XML查询已被禁用。错误修复o完全支持IGRAPH。不支持IGRAPH0,这意味着节点索引从1开始,而不是Igraph0或小于0.6.x版本Igraph。o go.cc和go.mf级指定的测试已修复。版本1.14.0的更改--------------------------------------新功能o多群概念 - 基因分析HTML报告支持互动网络,并提供Cytoscape Web支持以及原始固定 images o caBIO pathway and REACTOME pathway are included with xml queries, therefore, internet access is required. o The total number of pooled genes in Hypergeometric test can be set by the amount of genes in annotation library or the total annoted genes in the given species. o Add gene annotation summarization functions. Please check geneFunctionSummarize.pdf for more details. CHANGES IN VERSION 1.12.0 ---------------------- NEW FEATURES o Multigroup concept-gene analysis has been added. There are two types of representations. One is graphics table implemented by function 'drawTable', another is a html file generated by function 'groupReport' CHANGES IN VERSION 1.10.0 ---------------------- NEW FEATURES o Shades of nodes are introduced to stand for specified values given in the geneInput slot. o Statistical significant Ontology structure of given terms can be displayed by function 'geneAnswersConceptRelation' so that users can find more appropriate concepts in the significant concept list.