生物使用

doi:10.18129/b9.bioc.biocstyle

该包适用于生物导体的3.12版;对于稳定的最新版本,请参阅生物使用

小插图和其他生物导体文档的标准样式

生物导体版本:3.12

为生物导体PDF和HTML文档提供标准格式样式。bob彩票平台软件包插图说明了使用和功能。

作者:Andrzejoleś,Martin Morgan,Wolfgang Huber

维护者:bioconductor.org>的生物导体套件维护器<维护器>

引用(从r内,输入引用(“ BiocStyle”)):

安装

要安装此软件包,请启动R(版本“ 4.0”)并输入:

if(!sireseenamespace(“ biocmanager”,悄悄= true))install.packages(“ biocmanager”)biocmanager :: install(“ biocstyle”)

对于R的较旧版本,请参考适当的生物导体释放

文档

要查看系统中安装此软件包的版本的文档,请启动R并输入:

Browsevignettes(“ BiocStyle”)

html R脚本 授权r降价小插图
PDF R脚本 生物导体乳胶样式2.0
PDF 参考手册
文本 消息

细节

生物浏览 软件
版本 2.18.1
在生物导体中 Bioc 2.13(R-3.0)(7。5年)
执照 艺术2.0
要看
进口 预订,,,,尼特(> = 1.30),rmarkDown(> = 1.2),统计,utils,Yaml,,,,生物管理器
链接
建议 生物基因,,,,运行,,,,htmltools
系统要求
增强
URL https://github.com/bioconductor/biocstyle
BugReports https://github.com/bioconductor/biocstyle/issues
取决于我 策展人,,,,CytofworkFlow,,,,甲基化arrayAnalysy,,,,org.mxanthus.db,,,,rnaseqgene,,,,rnaseqgeneedgerql,,,,Sangeranalyser
进口我 Abseqr,,,,阿斯普利,,,,BiocworkFlowTools,,,,bprmeth,,,,气泡,,,,Chimeraviz,,,,罗盘,,,,装饰,,,,违规行为,,,,fieldeffectcrc,,,,Genextender,,,,梅利莎,,,,MSNID,,,,Pathostat,,,,甲状腺素,,,,重新注册,,,,地区报告,,,,rmmquant,,,,RQC,,,,sctensor,,,,sctgif,,,,Simplesinglecell,,,,Srnadiff
建议我 阿巴达塔,,,,Abaenrichment,,,,高手,,,,Adamgui,,,,适应性,,,,atimpute,,,,辅助,,,,Affycoretools,,,,骨料,,,,Ahensdbs,,,,ALDEX2,,,,ALEVINQC,,,,等位基因平衡,,,,一座山,,,,扩增器,,,,Aneufinder,,,,动物库,,,,注解,,,,AnnotationDbi,,,,AnnotationFilter,,,,注释,,,,AnnotationHub,,,,AnnotationHubdata,,,,AnnotationTools,,,,Annotatr,,,,anota2seq,,,,Anvilbilling,,,,Anvilpublish,,,,apalyzer,,,,ArrayQualityMetrics,,,,数组,,,,Artms,,,,asgsca,,,,ASIC,,,,asicsdata,,,,评估员,,,,essionorfdata,,,,分配,,,,atacseqqc,,,,ATSNP,,,,Aucell,,,,Baalchip,,,,培根,,,,bamsignals,,,,土匪,,,,basecallqc,,,,基本,,,,蛇怪,,,,basilisk.utils,,,,Batchelor,,,,Baynorm,,,,贝塞克,,,,beachmat,,,,Beadarray,,,,Beaddatapackr,,,,BEARSCC,,,,清楚,,,,Benchmarkfdrdata2019,,,,BGEEDB,,,,Bigmelon,,,,BigMemoryExtras,,,,生物萨尔,,,,Biobtreer,,,,生物加工者,,,,生物检查,,,,Biocdockermanager,,,,Biocfilecache,,,,Biocio,,,,Biocmetaworkflow,,,,生物脑,,,,Bioconcotk,,,,生物剂,,,,生物比较,,,,Biocpkgtools,,,,生物群,,,,生物兴奋,,,,Biocsklearn,,,,Biocthis,,,,Biomart,,,,生物形式,,,,Biomm,,,,生物签名,,,,Biotmle,,,,bitseq,,,,BlackSheepr,,,,Blima,,,,blimatestingdata,,,,BloodCancermultiomics2017,,,,Bluster,,,,BNBC,,,,Bodymaprat,,,,BrainflowProbes,,,,布拉替伯,,,,分支机构,,,,Breakpointr,,,,Breakpointrdata,,,,布伦达布,,,,Brgenomics,,,,桥梁,,,,Browserviz,,,,BSSEQ,,,,bumhmm,,,,buscrect,,,,Busparse,,,,咖啡店,,,,Cagefightr,,,,卡格,,,,CageWorkFlow,,,,Cancerinsilico,,,,,,,,红衣主教,,,,CardinalWorkflows,,,,催化剂,,,,CBAF,,,,cbioportaldata,,,,ccfindr,,,,CCREPE,,,,塞尔达,,,,窖藏,,,,蜂窝监测器,,,,蜂窝架,,,,CellDex,,,,细胞,,,,CellMapper,,,,CellMapperData,,,,细胞混蛋,,,,Celltree,,,,cexor,,,,cfdnapro,,,,ChemMinedRugs,,,,Chemmineob,,,,化学机器,,,,芝加哥,,,,芯片,,,,Chipenrich,,,,chipenrich.data,,,,chipexoqual,,,,Chippeakanno,,,,chipqc,,,,chipseqdb,,,,chipseqdbdata,,,,chipseqspike,,,,染色体,,,,Chromstar,,,,Chromswitch,,,,Citefuse,,,,分类,,,,清理,,,,切肉刀,,,,快船,,,,甲基化,,,,簇发酵,,,,clusterSeq,,,,群体意义,,,,clustifyr,,,,Clustifyrdatahub,,,,cmapr,,,,CNER,,,,cnvranger,,,,可可,,,,COGAPS,,,,彗星,,,,compcoder,,,,承认,,,,共识,,,,共识,,,,contibait,,,,Conumee,,,,CopyHelper,,,,CoperNeutralima,,,,库务,,,,copywriter,,,,警戒线,,,,Coregnet,,,,coregx,,,,畜栏,,,,宇宙67,,,,Cosmiq,,,,countclust,,,,covrna,,,,CPVSNP,,,,CRISPRSEEK,,,,crisprvariants,,,,CSAW,,,,csawusersguide,,,,CSSQ,,,,ctggem,,,,ctsge,,,,策划的布拉德达塔,,,,策展,,,,策划的元素元素,,,,策展人,,,,策展,,,,CustomCMPDB,,,,Cydar,,,,胞胎,,,,Cytomapper,,,,细胞动力,,,,Dada2,,,,达格洛戈,,,,damefinder,,,,达米尔塞克,,,,达帕尔,,,,达斯珀,,,,dcanr,,,,ddpcrclust,,,,Debcam,,,,碎片器,,,,Demptumor2sig,,,,Decontam,,,,变形,,,,DegReport,,,,延迟,,,,延迟的matrixstats,,,,densvis,,,,dep,,,,Depecher,,,,DEPMAP,,,,DEQMS,,,,德芬德,,,,derfinderdata,,,,derfinderhelper,,,,derfinderplot,,,,DESCAN2,,,,Dewseq,,,,dexseq,,,,Dialignr,,,,差异,,,,diffcyt,,,,差异,,,,不和谐,,,,Dittoseq,,,,dmelsgi,,,,DMRSCAN,,,,DMRSEQ,,,,DNABARCODECOPATIBLIDIASE,,,,DNABARCODES,,,,doppelgangr,,,,多萝西娅,,,,Doscheda,,,,剂量,,,,绘制蛋白,,,,Drimseq,,,,droplettestfiles,,,,液滴,,,,DSS,,,,DuoClustering2018,,,,杜普拉达尔,,,,轻松报告,,,,EasyRnaseq,,,,ebimage,,,,EDASEQ,,,,Egsea,,,,EGSEA123,,,,EIR,,,,艾萨尔,,,,埃尔默,,,,Elmer.Data,,,,经验棕色,,,,富集兄弟,,,,Ensembldb,,,,繁殖,,,,epitxdb,,,,epitxdb.hs.hg38,,,,epitxdb.mm.mm10,,,,epitxdb.sc.saccer3,,,,epivizr,,,,epivizrchart,,,,epivizrdata,,,,Epivizrserver,,,,EPIVIZRSTANTALLONE,,,,eqtl,,,,Erma,,,,ERSSA,,,,逃脱,,,,eupathdb,,,,评估,,,,EventPointer,,,,实验室,,,,实验室,,,,实验值,,,,ExploreModelMatrix,,,,表达式正式工作流,,,,Famagg,,,,Famat,,,,FastQCleaner,,,,FCCAC,,,,FCI,,,,fcscan,,,,小伙子,,,,Filterffpe,,,,Findmyfriends,,,,FlowCatchr,,,,流程图,,,,流动,,,,Flowspecs,,,,flowspy,,,,FMCSR,,,,Fourcseq,,,,弗雷泽,,,,Furrowseg,,,,ga4ghclient,,,,ga4ghshiny,,,,加尔斯,,,,GCAPC,,,,GCSconnection,,,,GCSFILESYSTEM,,,,GDSARRAY,,,,GenBankr,,,,Geneaccord,,,,GeneFilter,,,,GenEnetworkbuilder,,,,Geneoverlap,,,,Geneplast,,,,结肠管制,,,,创世纪,,,,GenStructurotootools,,,,遗传,,,,Genogam,,,,GenomeInfodB,,,,基因组签名,,,,GenomicDataCommons,,,,GenomicFeatures,,,,Genomicfiles,,,,基因组间,,,,基因组机,,,,GenomicsCores,,,,基因组态,,,,基因组菌,,,,Genoset,,,,Genvisr,,,,geuvadistranscriptexpr,,,,GGBIO,,,,GGPA,,,,Gladiatox,,,,glimma,,,,Glmgampoi,,,,Glmsparsenet,,,,Gmoviz,,,,GMRP,,,,goexpress,,,,Gofuncr,,,,Gopro,,,,gostag,,,,GPART,,,,gpumagic,,,,GQTLBASE,,,,gqtlstats,,,,Graper,,,,石墨,,,,Greylistchip,,,,Grmetrics,,,,grohmm,,,,GSAR,,,,GSE62944,,,,gseabase,,,,GSEABENCHMARKER,,,,Gseaming,,,,GSGALGOR,,,,Guideseq,,,,GVIZ,,,,gwas.bayes,,,,Gwascat,,,,Gwasurvivr,,,,格纳,,,,哈曼,,,,Harmandata,,,,hcabrowser,,,,HCADATA,,,,HCAEXPLORER,,,,hcamatrixbrowser,,,,HD2013SGI,,,,hdcytodata,,,,HDF5Array,,,,Helloranges,,,,Hellorangesdata,,,,赫珀,,,,打ic,,,,高度复制的Rnaseq,,,,高通量库,,,,Hiiragi2013,,,,希尔达,,,,Hipathia,,,,Hireewas,,,,HITC,,,,HMP16SDATA,,,,HMP2DATA,,,,hpaanalyze,,,,hpannot,,,,HPAR,,,,htsfilter,,,,人类affydata,,,,人录取组成,,,,理想的,,,,IGC,,,,iggenusage,,,,IGVR,,,,ihw,,,,ihwpaper,,,,Illuminaio,,,,ImageHts,,,,IMAS,,,,输铁烯,,,,免疫剂,,,,校正,,,,inpas,,,,检查,,,,intad,,,,互动集,,,,Interminer,,,,电离,,,,iranges,,,,Isanalytics,,,,我明白,,,,iseeu,,,,Isomirs,,,,IVAS,,,,JCTSEQDATA,,,,接口,,,,核粒子,,,,,,,,蕾丝,,,,ldblock,,,,Lefser,,,,举起,,,,linkHD,,,,linnorm,,,,lipidr,,,,loci2path,,,,logolas,,,,萝拉,,,,loomexpermiment,,,,Lowmaca,,,,rpsymphony,,,,lrbasedbi,,,,Macpet,,,,制造4,,,,Maendtoend,,,,Mageckflute,,,,MAPKL,,,,马尔,,,,马瑟,,,,桅杆,,,,母子,,,,事情,,,,mbased,,,,mbkmeans,,,,mbttest,,,,McBiclust,,,,MCSEA,,,,McSeadata,,,,MDGSA,,,,一顿饭,,,,,,,,MEB,,,,Medips,,,,Megadepth,,,,墨西拿,,,,代谢组工厂,,,,代谢信号,,,,metagene,,,,metagene2,,,,元全征,,,,metagxpancreas,,,,metavizr,,,,甲基,,,,甲基赫里西氏菌,,,,冰毒,,,,甲基,,,,甲基化,,,,甲基辅助,,,,甲基接受,,,,甲基硫酸,,,,甲基粘合,,,,甲基Seqdata,,,,甲基化,,,,methyvim,,,,Methyvimdata,,,,metnet,,,,MFA,,,,微生物组,,,,Migsa,,,,mimager,,,,Minfi,,,,Minionsummarydata,,,,米拉,,,,mircomp,,,,Mirmine,,,,mirsm,,,,mirsponger,,,,甲基小姐,,,,失误,,,,混合学,,,,mlseq,,,,mmappr2,,,,mmappr2data,,,,mmdiff2,,,,mmuphin,,,,moda,,,,modstrings,,,,Mogamun,,,,莫格萨,,,,妈妈,,,,MOONLIGHTR,,,,Mosim,,,,Motifbreakr,,,,主题,,,,Motifstack,,,,MouseFM,,,,MousegastrulationData,,,,mpra,,,,mscoreutils,,,,MSEADBI,,,,MSIMPUTE,,,,MSMB,,,,MSNBase,,,,MSPREP,,,,M型,,,,MSQC1,,,,MSSTATS,,,,MSSTATSBIODATA,,,,MSSTATSPTM,,,,msstatssamples,,,,MSSTATSTMT,,,,MSSTATSTMTPTM,,,,多亚sayExexperiment,,,,Multibac,,,,Multicrispr,,,,多胎,,,,多人,,,,多希克科姆,,,,多米,,,,马斯喀特,,,,muscdata,,,,Musicatk,,,,突变模式,,,,mwastools,,,,mygene,,,,myvariant,,,,MZR,,,,NADFINDER,,,,Nanostringdiff,,,,NanostringQccpro,,,,纳米管,,,,狭窄,,,,nbsplice,,,,NCGTW,,,,ncrnatools,,,,ndexr,,,,星云,,,,雏形,,,,Netbiov,,,,Netboxr,,,,nethet,,,,NetPathminer,,,,Netprior,,,,NetReg,,,,NetSmooth,,,,新浪潮,,,,NGSReports,,,,无索引,,,,普通剂,,,,NORMR,,,,NPARC,,,,NPGSEA,,,,核素,,,,,,,,奥利戈,,,,Omicade4,,,,Omicrexposom,,,,OMICSMARKER,,,,OMICSPRINT,,,,omixer,,,,Omnipathr,,,,Onassis,,,,Onassisjavalibs,,,,oncoscore,,,,Oncosimulr,,,,Ontoproc,,,,OptimalFlow,,,,OptimalFlowData,,,,关键,,,,ORFIK,,,,有机体,,,,示波器,,,,校长,,,,Oveseg,,,,PAA,,,,包装,,,,帕德玛,,,,配对,,,,panther.db,,,,Panvizgenerator,,,,甲状旁腺,,,,parglms,,,,模仿,,,,帕西拉,,,,pasillatranscriptexpr,,,,path2ppi,,,,Paxtoolsr,,,,PCAEXPLORER,,,,PCAN,,,,pchicdata,,,,PEACOQC,,,,峰板,,,,pepsnmr,,,,pepsnmrdata,,,,扰动,,,,PGA,,,,phantasus,,,,苯酚,,,,菲尔,,,,门索,,,,pi,,,,钢琴,,,,皮革,,,,管道,,,,苍白,,,,plotgrouper,,,,plyranges,,,,PMP,,,,polyfit,,,,POMA,,,,波特拉,,,,powertcr,,,,PQSFINDER,,,,婴儿车,,,,Precisetad,,,,Precisiontrialldrawer,,,,王子,,,,profileplyr,,,,概括者访问者,,,,后代,,,,Projectr,,,,proloc,,,,Prolocgui,,,,恰当的,,,,妓女,,,,蛋白质组学,,,,蛋白质组学杂志,,,,Proteomm,,,,psea,,,,属属,,,,pwmenrich,,,,QCMetrics,,,,QDNASEQ,,,,qfeatures,,,,qpgraph,,,,QSEA,,,,QSmooth,,,,QSUTILS,,,,qtlizer,,,,Quantro,,,,,,,,R3CPET,,,,Radiogx,,,,破烂的经历,,,,,,,,拉姆瓦斯,,,,RandomWalkRestArtMH,,,,兰特罗,,,,RAT2302FRMAVEC,,,,rbowtie,,,,rcade,,,,rcellminer,,,,rcellminerdata,,,,RCGH,,,,rcistarget,,,,rcwl,,,,RCWLPIPELINE,,,,RCY3,,,,rcyjs,,,,rdgidb,,,,Reactomepa,,,,叙事,,,,ROCOUT3,,,,重新甲基化,,,,recountworkflow,,,,补偿,,,,Reder,,,,区域人,,,,regsplice,,,,Regutools,,,,Reqon,,,,残留matrix,,,,安息,,,,rexposom,,,,rfarm,,,,RFASTP,,,,rforpoteomics,,,,rfpred,,,,RGMQL,,,,rgmqllib,,,,rgraph2js,,,,RGSEA,,,,RHDF5,,,,Rhdf5client,,,,RHDF5FILTERS,,,,Rhdf5lib,,,,RHISAT2,,,,Rhtslib,,,,肋骨蛋白,,,,riboseqr,,,,RibosomeProfilingQC,,,,,,,,RJMCMCN核小体,,,,rmassbank,,,,rnamodr,,,,rnamodr.alkanilineseq,,,,rnamodr.data,,,,rnamodr.ml,,,,rnamodr.ribomethseq,,,,rnaprobr,,,,RNASEQ123,,,,rnaseqcomp,,,,rnaseqsamples,,,,rnaseqsamplesizedata,,,,rnits,,,,Rocpai,,,,洛尔,,,,ropls,,,,rpx,,,,RQT,,,,rrvgo,,,,rsamtools,,,,rscudo,,,,RSEMMED,,,,RSWEEP,,,,rtcgatoolbox,,,,RTN,,,,rtnduals,,,,rtnsurvival,,,,RTPCA,,,,Ruvseq,,,,RVS,,,,rwikipathways,,,,S4VECTORS,,,,samexplorer,,,,采样分类剂,,,,SampleClalsifierData,,,,Sangerseqr,,,,Sapfinder,,,,评分,,,,SCCB2,,,,ScClassify,,,,scdblfinder,,,,SCDD,,,,SCDS,,,,scfeaturefilter,,,,Sclcbam,,,,Scmerge,,,,scnorm,,,,烤饼,,,,Scoreinvhap,,,,SCP,,,,SCPCA,,,,斯克兰,,,,屏幕,,,,scrnaseq,,,,颈背,,,,砍伐,,,,片段,,,,Selectksigs,,,,seqcat,,,,Seqgate,,,,seqlogo,,,,seqpattern,,,,seqplots,,,,seqsetvis,,,,seqsqc,,,,测序,,,,Seqvartools,,,,芝麻,,,,setools,,,,塞文,,,,sgseq,,,,共享对象,,,,苯基甲基,,,,Shortread,,,,暹罗,,,,西格克,,,,sigfuge,,,,SignaturesEarch,,,,签名,,,,sigspack,,,,simd,,,,simffpe,,,,相似,,,,simlr,,,,Simulatorz,,,,辛克尔,,,,single.mtec.transcriptomes,,,,Singlecellexperiment,,,,Singlecelltk,,,,辛格,,,,singscoreamlmutations,,,,SitePath,,,,弹弓,,,,紧身,,,,Smad,,,,快照,,,,Snifter,,,,snpediar,,,,Snphood,,,,snphooddata,,,,soggi,,,,寄居者,,,,Sparsedossa,,,,Sparsematrixstats,,,,Sparsenetgls,,,,稀疏,,,,空间,,,,空间Heatmap,,,,空间Libd,,,,规格,,,,光谱,,,,光谱,,,,spicyr,,,,蜘蛛网,,,,飞溅,,,,碎片,,,,SPQN,,,,spsimseq,,,,Sracipe,,,,SSPA,,,,斯塔格,,,,斯坦,,,,Starbiotrek,,,,stategra,,,,Stattarget,,,,Strandcheckr,,,,结构,,,,结构线,,,,structToolbox,,,,subcellbarcode,,,,总结,,,,总结性特征,,,,SVA,,,,SVAPLSSEQ,,,,SWFDR,,,,switchde,,,,突触,,,,Systempiper,,,,SystemPiperData,,,,SystemPipeshiny,,,,Tabulamurisdata,,,,Tadcompare,,,,TargetSearch,,,,art,,,,tbsignatureprofiler,,,,tcgabiolinks,,,,tcgabiolinksgui,,,,tcgabiolinksgui.data,,,,tcgautils,,,,tenxbraindata,,,,tenxbusdata,,,,tenxpbmcdata,,,,tfarm,,,,TFBSTOOLS,,,,TFHAZ,,,,tfutils,,,,tidybulk,,,,tidysinglecellexperiment,,,,tidysummarizedExperiment,,,,蒂格,,,,TiledBarray,,,,时间赛车,,,,时间表学,,,,计时,,,,组织,,,,tmexplorer,,,,tmixclust,,,,吐司,,,,码头,,,,topaseq,,,,TopConfects,,,,TopDownr,,,,有毒,,,,TPP,,,,TrackTables,,,,TrackViewer,,,,转录图,,,,transcriptr,,,,Transomics2Cytoscape,,,,Traser,,,,Treeandleaf,,,,树木化的特殊性,,,,时髦的,,,,tRNA,,,,Trnadbimport,,,,Trnascanimport,,,,Tronco,,,,ttmap,,,,涡轮瘤,,,,TVTB,,,,twoddpcr,,,,Ularcirc,,,,umi4cats,,,,发现,,,,uniprot.ws,,,,方差分区,,,,变体,,,,变体滤波器,,,,变体,,,,VariantToolsData,,,,vcfarray,,,,Velociraptor,,,,verso,,,,vidger,,,,Viseago,,,,VSN,,,,Wavcluster,,,,Weitrix,,,,WPM,,,,XBSEQ,,,,XCMS,,,,Xeva,,,,山药,,,,yapsa,,,,yrimulti,,,,斑马鱼,,,,Zellkonverter,,,,Zinbwave
链接到我
构建报告

包装档案

跟随bob 体育网址 在R会话中使用此软件包的说明。

源包 BiocStyle_2.18.1.tar.gz
Windows二进制 BiocStyle_2.18.1.zip
MacOS 10.13(高山脉) BiocStyle_2.18.1.tgz
源存储库 git克隆https://git.bioconductor.org/packages/biocstyle
源存储库(开发人员访问) git clone git@git.bioconductor.org:packages/biocStyle
包装短URL //www.anjoumacpherson.com/packages/biocstyle/
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