BiocParallel
DOI:
10.18129 / B9.bioc.BiocParallel
这个包是3.11版本Bioconductor;的稳定,最新的发布版本,请参阅BiocParallel。
Bioconductor设施并行评估
Bioconductor版本:3.11
这个包提供修改版本和新颖的实现函数并行评估,根据使用Bioconductor对象。
作者:Bioconductor包维护者(cre),马丁·摩根(aut),瓦莱丽Obenchain (aut),米歇尔•朗(aut)瑞恩•汤普森(aut) Nitesh Turaga (aut)
维修工:Bioconductor包维护者<维护者bioconductor.org >
从内部引用(R,回车引用(“BiocParallel”)):
安装
安装这个包,开始R(版本“4.0”)并输入:
如果(!requireNamespace (“BiocManager”,悄悄地= TRUE)) install.packages (“BiocManager”) BiocManager::安装(“BiocParallel”)
R的旧版本,请参考适当的Bioconductor释放。
文档
查看文档的版本这个包安装在您的系统,开始R和输入:
browseVignettes (“BiocParallel”)
细节
| biocViews |
基础设施,软件 |
| 版本 |
1.22.0 |
| Bioconductor自 |
BioC 2.13 (r - 3.0)(7年) |
| 许可证 |
GPL-2 | GPL-3 |
| 取决于 |
方法 |
| 进口 |
属性,跑龙套,futile.logger平行,雪 |
| 链接 |
黑洞 |
| 建议 |
BiocGenerics、工具、foreach,BatchJobs,BBmisc,doParallel,Rmpi,GenomicRanges,RNAseqData.HNRNPC.bam.chr14,TxDb.Hsapiens.UCSC.hg19.knownGene,VariantAnnotation,Rsamtools,GenomicAlignments,ShortRead,codetools,RUnit,BiocStyle,knitr,batchtools,data.table |
| SystemRequirements |
c++ 11 |
| 增强了 |
|
| URL |
https://github.com/Bioconductor/BiocParallel |
| BugReports |
https://github.com/Bioconductor/BiocParallel/issues |
| 取决于我 |
培根,BEclear,红衣主教,ClassifyR,clusterSeq,consensusSeekeR,文案,德科,DEWSeq,DEXSeq,DMCFB,DMCHMM,doppelgangR,DSS,弗雷泽,GenomicFiles,hiReadsProcessor,检查,事,工商管理硕士,metagene,metagene2,ncGTW,Oscope,先驱者,PCAN,pRoloc,Rqc,测序,ShortRead,SigCheck,STROMA4,SummarizedBenchmark,股东价值分析,xcms |
| 进口我 |
abseqR,AffiXcan,ALDEx2,AlphaBeta,阿尔卑斯山脉,amplican,亚瑟士,ASpediaFI,atSNP,强盗,后面;,bayNorm,BiocNeighbors,BioCor,BiocSingular,BioMM,BioNetStat,biotmle,biscuiteer,brendaDb,bsseq,CAGEfightR,篮球选手,CAMTHC,cellbaseR,CellBench,CellMixS,ChIPexoQual,ChIPQC,chromswitch,chromVAR,CNVRanger,CoGAPS,consensusDE,contiBAIT,CoreGx,coseq,cpvSNP,CRISPRseek,CrispRVariants,csaw,cydar,dcGSA,debCAM,DEComplexDisease,DelayedMatrixStats,derfinder,DEScan2,DESeq2,DEsingle,DiffBind,dmrseq,剂量,DRIMSeq,DropletUtils,沙丘,easyRNASeq,EMDomics,erma,ERSSA,exomePeak2,fgsea,FindMyFriends,flowcatchR,flowSpecs,GDCRNATools,GenoGAM,GenomicAlignments,genotypeeval,gmapR,gscreend,GSEABenchmarkeR,GSVA,GUIDEseq,h5vc,HiCBricks,HiCcompare,HTSeqGenie,HTSFilter,iasva,icetea,理想的,IHWpaper,ima,ImpulseDE2,InPAS,感兴趣,电离,首次公开募股,iva,JunctionSeq,KinSwingR,LineagePulse,loci2path,LowMACA,MACPET,mbkmeans,MCbiclust,metabomxtr,metaseqR2,MethCP,MethylAid,methylGSA,methylInheritance,methyvim,MetNet,MIGSA,minfi,MMAPPR2,motifbreakR,MPRAnalyze,MSnbase,MSstatsSampleSize,multiHiCcompare,马斯喀特,NBAMSeq,NBSplice,NPARC,OmicsLonDA,ORFik,OVESEG,PAIRADISE,PCAtools,PharmacoGx,PowerExplorer,婴儿车,PrecisionTrialDrawer,proFIA,profileplyr,qpgraph,qsea,QuasR,Rcwl,重新计票,REMP,RJMCMCNucleosomes,RNAmodR,Rsamtools,RUVcorr,嘘,scClassify,scDblFinder,scDD,scde,散粒,scMerge,SCnorm,司康饼,scoreInvHap,scPCA,食物,scRecover,颈背,scTHI,芝麻,SEtools,sigFeature,signatureSearch,单,singscore,SNPhood,soGGi,SpectralTAD,spicyR,飞溅,SplicingGraphs,srnadiff,TAPseq,TarSeqQC,TBSignatureProfiler,TFBSTools,TMixClust,TPP2D,tradeSeq,trena,时尚的,TSRchitect,TVTB,TxRegInfra,variancePartition,VariantFiltering,VariantTools,waddR,weitrix,zinbwave |
| 建议我 |
CAGEWorkflow,嵌合体,curatedMetagenomicData,DelayedArray,glmGamPoi,HDF5Array,MethylAidData,netSmooth,omicsPrint,PureCN,randRotation,RcisTarget,scGPS,SeqArray,systemPipeR,TENxBrainData,TENxPBMCData,TFutils,tofsims,universalmotif |
| 我的链接 |
|
| 构建报告 |
|
包档案
遵循bob 体育网址
指示在R会话中使用这个包。
