BiocGenerics

DOI:10.18129 / B9.bioc.BiocGenerics

这个包是3.11版本Bioconductor;的稳定,最新的发布版本,请参阅BiocGenerics

S4 Bioconductor中使用的通用函数

Bioconductor版本:3.11

包定义了S4 Bioconductor中使用的通用函数。

作者:Bioconductor Dev团队

维修工:Bioconductor包维护者<维护者bioconductor.org >

从内部引用(R,回车引用(“BiocGenerics”)):

安装

安装这个包,开始R(版本“4.0”)并输入:

如果(!requireNamespace (“BiocManager”,悄悄地= TRUE)) install.packages (“BiocManager”) BiocManager::安装(“BiocGenerics”)

R的旧版本,请参考适当的Bioconductor释放

文档

PDF 参考手册

细节

biocViews 基础设施,软件
版本 0.34.0
Bioconductor自 BioC 2.10 (r - 2.15)(8.5年)
许可证 艺术- 2.0
取决于 R(> = 3.6.0)、方法、跑龙套,图形、统计、并行
进口 方法、跑龙套、图形、数据、平行
链接
建议 Biobase,S4Vectors,IRanges,GenomicRanges,DelayedArray,Biostrings,Rsamtools,AnnotationDbi,oligoClasses,益生元,affyPLM,flowClust,affy,DESeq2,MSnbase,注释,RUnit
SystemRequirements
增强了
URL
取决于我 ACME,affy,affyPLM,altcdfenvs,amplican,AnnotationDbi,AnnotationForge,AnnotationHub,ATACseqQC,beadarray,bioassayR,Biobase,Biostrings,bnbc,BSgenome,bsseq,红衣主教,类别,categoryCompare,ChAMPdata,chipseq,ChIPseqR,ChromHeatMap,cleanUpdTSeq,clusterExperiment,codelink,consensusDE,consensusSeekeR,copynumber,CRISPRseek,腰带,DelayedArray,DESeq,dexus,ensembldb,ensemblVEP,ExperimentHub,ExperimentHubData,有限元法,GDSArray,geneplotter,GenomeInfoDb,genomeIntervals,GenomicAlignments,GenomicFeatures,GenomicFiles,GenomicRanges,GenomicScores,Genominator,genoset,ggbio,girafe,,GSEABase,GUIDEseq,HelloRanges,interactiveDisplay,interactiveDisplayBase,IRanges,liftOver,工商管理硕士,MeSHDbi,methyAnalysis,MIGSA,MineICA,minfi,MLInterfaces,MotifDb,MotIV,mpra,MSnbase,,NADfinder,ngsReports,益生元,OrganismDbi,pandaR,plethy,plyranges,PoTRA,profileplyr,PSICQUIC,PWMEnrich,QSutils,RareVariantVis,REDseq,Repitools,RNAprobR,RnBeads,,rsbml,S4Vectors,scsR,shinyMethyl,ShortRead,simpleaffy,simulatorZ,soGGi,spqn,StructuralVariantAnnotation,SummarizedBenchmark,TEQC,tigre,topdownr,topGO,撤销,UniProt.ws,VanillaICE,VariantAnnotation,VariantFiltering,VCFArray,XVector,山药
进口我 affycoretools,affylmGUI,AllelicImbalance,AneuFinder,annmap,注释,AnnotationHubData,ArrayExpressHTS,ASpli,AUCell,bamsignals,基础知识,后面;,beachmat,bigmelon,biocGraph,BiocSingular,biosvd,biotmle,biovizBase,biscuiteer,BiSeq,blima,breakpointR,BrowserViz,BSgenome,BubbleTree,bumphunter,BUSpaRse,CAGEfightR,篮球选手,卡斯珀,celaref,cellHTS2,CellMixS,CellTrails,cgdv17,cghMCR,ChemmineDrugs,ChemmineOB,ChemmineR,别致的,ChIPComp,chipenrich,chipenrich.data,ChIPpeakAnno,ChIPQC,ChIPseeker,chipseq,ChIPSeqSpike,chromstaR,chromVAR,西塞罗,clusterSeq,cn.mops,cn,cobindR,可可,可乐,compEpiTools,contiBAIT,crlmm,crossmeta,csaw,ctgGEM,腰带,curatedCRCData,curatedOvarianData,cydar,dada2,dagLogo,DAMEfinder,ddCt,decompTumor2Sig,DEGreport,DelayedDataFrame,derfinder,DEScan2,DESeq2,命运,DEWSeq,DEXSeq,diffcoexp,diffHic,DirichletMultinomial,DiscoRhythm,DRIMSeq,DrugVsDisease,easyRNASeq,EBImage,EDASeq,eiR,eisa,eisaR,enrichTF,epigenomix,EpiTxDb,epivizrChart,epivizrStandalone,erma,esATAC,FamAgg,fastseg,ffpe,FindMyFriends,flowBin,flowClust,flowCore,flowFP,FlowSOM,flowSpecs,flowStats,flowWorkspace,fmcsR,弗雷泽,frma,FunciSNP,GA4GHclient,GA4GHshiny,gcapc,gCMAPWeb,genbankr,geneAttribution,geneClassifiers,genefilter,《创世纪》,GenomicAlignments,GenomicInteractions,GenomicTuples,genotypeeval,GenVisR,GGBase,GGtools,gmapR,gmoviz,goseq,哥特,gpuMagic,gQTLBase,gQTLstats,GSVA,Gviz,gwascat,HDF5Array,的热图,希尔达,hiReadsProcessor,hopach,HTSeqGenie,icetea,igvR,IHW,IHWpaper,ima,infercnv,检查,InTAD,intansv,InteractionSet,感兴趣,电离,iSEE,isomiRs,iva,JunctionSeq,KCsmart,KEGGandMetacoreDzPathwaysGEO,KEGGdzPathwaysGEO,ldblock,ldblock,萝拉,LVSmiRNA,M3D,微波激射器,桅杆,,,meshr,metaMS,methInheritSim,MethylAid,methylPipe,methylumi,methyvim,mimager,MinimumDistance,米拉,海市蜃楼,missMethyl,MMAPPR2,Modstrings,mogsa,单片眼镜,motifbreakR,MouseGastrulationData,msa,MTseeker,MultiAssayExperiment,MultiDataSet,multiMiR,MutationalPatterns,mzR,NarrowPeaks,ncdfFlow,npGSEA,诊断,oligoClasses,OmicsLonDA,openCyto,openPrimeR,ORFik,先驱者,parglms,PathwaySplice,pcaMethods,pdInfoBuilder,phemd,phyloseq,π,钢琴,,赢钱,podkat,普拉达,婴儿车,primirTSS,proDA,profileScoreDist,pRoloc,PureCN,pwOmics,qPLEXanalyzer,qsea,QuasR,R3CPET,R453Plus1Toolbox,RaggedExperiment,ramwas,Rariant,美国广播公司,RcisTarget,RCy3,RCyjs,收回,RefNet,REMP,ReportingTools,RGalaxy,RGMQL,RGSEA,RiboProfiling,ribosomeProfilingQC,林格,RJMCMCNucleosomes,RNAmodR,RNAmodR.AlkAnilineSeq,RNAmodR.ML,RNAmodR.RiboMethSeq,咆哮,的方式,Rqc,rqubic,Rsamtools,rsbml,rScudo,RTCGAToolbox,rtracklayer,SC3,,scmap,SCnorm,范围,scPipe,食物,scRNAseq,颈背,sevenC,SGSeq,SharedObject,签名者,simpleaffy,SingleCellExperiment,,SLGI,SNPhood,SNPlocs.Hsapiens.dbSNP144.GRCh37,SNPlocs.Hsapiens.dbSNP144.GRCh38,SNPlocs.Hsapiens.dbSNP149.GRCh38,SNPlocs.Hsapiens.dbSNP150.GRCh38,SNPlocs.Hsapiens.dbSNP151.GRCh38,snpStats,SparseSignatures,spicyR,飞溅,SplicingGraphs,SQLDataFrame,sRACIPE,sscu,斯坦,strandCheckR,拖缆,Structstrings,SummarizedExperiment,SynMut,systemPipeRdata,TAPseq,目标,TarSeqQC,TCGAutils,TCseq,TENxBUSData,TFBSTools,TitanCNA,trackViewer,transcriptR,石棉水泥板,TransView,TreeSummarizedExperiment,triform,tRNA,tRNAdbImport,tRNAscanImport,TSRchitect,TVTB,Ularcirc,unifiedWMWqPCR,universalmotif,的作用,VariantTools,VariantToolsData,wavClusteR,weitrix,xcms,XDE,XtraSNPlocs.Hsapiens.dbSNP144.GRCh37,XtraSNPlocs.Hsapiens.dbSNP144.GRCh38,XVector
建议我 acde,的目标是,ArrayTV,资产,BaalChIP,baySeq,BDMMAcorrect,bigmelon,bigmemoryExtras,bigPint,BiocCheck,BiocParallel,BiocStyle,biocViews,BioMM,biosigner,BiRewire,BLMA,BUScorrect,咖啡馆,相机,CancerSubtypes,萤石,CausalR,ccrepe,CellNOptR,CexoR,ChIPanalyser,ChIPXpress,CHRONOS,CINdex,限幅器,clonotypeR,clustComp,CNORfeeder,CNORfuzzy,CNVPanelizer,coexnet,彗星,ConnectivityMap,共识,cosmiq,COSNet,cpvSNP,DAPAR,DBChIP,DEsubs,DMRcaller,DMRcate,ENCODExplorer,ENCODExplorerData,EnhancedVolcano,ENmix,epiNEM,EventPointer,fCCAC,fcScan,FGNet,flowCL,FlowRepositoryR,flowSpy,flowTime,focalCall,GateFinder,gCMAP,gCrisprTools,gdsfmt,宝石,GeneNetworkBuilder,GeneOverlap,geneplast,geneRxCluster,geNetClassifier,genomation,GEOquery,GMRP,GOstats,GraphPAC,GreyListChIP,grndata,GWASTools,h5vc,哈曼,HarmanData,hiAnnotator,hierGWAS,HIREewas,超图,iCARE,iClusterPlus,illuminaio,InPAS,INPower,首次公开募股,烤肉串,KEGGREST,花边,林肯,LRBase.Ath.eg.db,LRBase.Bta.eg.db,LRBase.Cel.eg.db,LRBase.Dme.eg.db,LRBase.Dre.eg.db,LRBase.Gga.eg.db,LRBase.Hsa.eg.db,LRBase.Mmu.eg.db,LRBase.Pab.eg.db,LRBase.Rno.eg.db,LRBase.Ssc.eg.db,LRBase.Xtr.eg.db,LRBaseDbi,mAPKL,massiR,MatrixRider,mbt,mCSEA,mdgsa,Mergeomics,MeSH.Aca.eg.db,MeSH.Aga.PEST.eg.db,MeSH.Ame.eg.db,MeSH.Aml.eg.db,MeSH.Ana.eg.db,MeSH.Ani.FGSC.eg.db,MeSH.AOR.db,MeSH.Ath.eg.db,MeSH.Bfl.eg.db,MeSH.Bsu.168.eg.db,MeSH.Bta.eg.db,MeSH.Cal.SC5314.eg.db,MeSH.Cbr.eg.db,MeSH.Cel.eg.db,MeSH.Cfa.eg.db,MeSH.Cin.eg.db,MeSH.Cja.eg.db,MeSH.Cpo.eg.db,MeSH.Cre.eg.db,MeSH.Dan.eg.db,MeSH.db,MeSH.Dda.3937.eg.db,MeSH.Ddi.AX4.eg.db,MeSH.Der.eg.db,MeSH.Dgr.eg.db,MeSH.Dme.eg.db,MeSH.Dmo.eg.db,MeSH.Dpe.eg.db,MeSH.Dre.eg.db,MeSH.Dse.eg.db,MeSH.Dsi.eg.db,MeSH.Dvi.eg.db,MeSH.Dya.eg.db,MeSH.Eco.55989.eg.db,MeSH.Eco.ED1a.eg.db,MeSH.Eco.IAI39.eg.db,MeSH.Eco.K12.MG1655.eg.db,MeSH.Eco.O157.H7.Sakai.eg.db,MeSH.Eco.UMN026.eg.db,MeSH.Eqc.eg.db,MeSH.Gga.eg.db,MeSH.Gma.eg.db,MeSH.Hsa.eg.db,MeSH.Laf.eg.db,MeSH.Lma.eg.db,MeSH.Mdo.eg.db,MeSH.Mes.eg.db,MeSH.Mga.eg.db,MeSH.Miy.eg.db,MeSH.Mml.eg.db,MeSH.Mmu.eg.db,MeSH.Mtr.eg.db,MeSH.Nle.eg.db,MeSH.Oan.eg.db,MeSH.Ocu.eg.db,MeSH.Oni.eg.db,MeSH.Osa.eg.db,MeSH.Pab.eg.db,MeSH.Pae.PAO1.eg.db,MeSH.PCR.db,MeSH.Pfa.3D7.eg.db,MeSH.Pto.eg.db,MeSH.Ptr.eg.db,MeSH.Rno.eg.db,MeSH.Sce.S288c.eg.db,MeSH.Sco.A32.eg.db,MeSH.Sil.eg.db,MeSH.Spu.eg.db,MeSH.Ssc.eg.db,MeSH.Syn.eg.db,MeSH.Tbr.9274.eg.db,MeSH.Tgo.ME49.eg.db,MeSH.Tgu.eg.db,MeSH.Vvi.eg.db,MeSH.Xla.eg.db,MeSH.Xtr.eg.db,MeSH.Zma.eg.db,金属底座,MetaboSignal,metagene,metagene2,metagenomeSeq,metaseqR,metaseqR2,MetCirc,methylCC,methylInheritance,MetNet,微生物组,microRNAome,MIGSAdata,miRBaseConverter,miRcomp,mirIntegrator,miRLAB,Mirsynergy,mnem,motifStack,MSnID,multiClust,MultiMed,multiOmicsViz,MWASTools,NBSplice,netbenchmark,netbiov,NetSAM,nondetects,NoRCE,nucleoSim,OMICsPCA,OncoScore,PAA,panelcn.mops,Path2PPI,PathNet,pathview,PCAtools,pepXMLTab,PGA,PhenStat,powerTCR,,proBAMr,proFIA,proteoQC,pwrEWAS,pwrEWAS.data,qpgraph,quantro,QuartPAC,RBGL,rBiopaxParser,Rcade,rcellminer,rCGH,Rcpi,REBET,RegParallel,rfaRm,RGraph2js,Rgraphviz,rgsepd,riboSeqR,ROntoTools,ropls,ROSeq,研制,RTNduals,RTNsurvival,rTRM,SAIGEgds,samExploreR,sangerseqR,圣诞老人,sapFinder,衬衣,scmeth,用水晶球占卜,segmentSeq,SeqArray,seqPattern,seqTools,SeqVarTools,sesameData,SICtools,sigFeature,sigsquared,SIMAT,similaRpeak,SIMLR,弹弓,SNPRelate,寄居,SpacePAC,sparseDOSSA,specL,STATegRa,STRINGdb,systemPipeR,移行细胞癌,TFEA.ChIP,,transcriptogramer,tra利用,TreeAndLeaf,trena,TRONCO,Uniquorn,variancePartition
我的链接
构建报告

包档案

遵循bob 体育网址 指示在R会话中使用这个包。

源包 BiocGenerics_0.34.0.tar.gz
Windows二进制 BiocGenerics_0.34.0.zip
macOS 10.13(高山脉) BiocGenerics_0.34.0.tgz
源库 git克隆https://git.bioconductor.org/packages/BiocGenerics
源库(开发人员访问) git克隆git@git.bioconductor.org:包/ BiocGenerics
包短Url //www.anjoumacpherson.com/packages/BiocGenerics/
包下载报告 下载数据

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