AnnotationFilter

DOI:10.18129/B9.bioc.AnnotationFilter

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, seeAnnotationFilter.

Facilities for Filtering Bioconductor Annotation Resources

Bioconductor version: 3.11

This package provides class and other infrastructure to implement filters for manipulating Bioconductor annotation resources. The filters will be used by ensembldb, Organism.dplyr, and other packages.

Author: Martin Morgan [aut], Johannes Rainer [aut], Joachim Bargsten [ctb], Daniel Van Twisk [ctb], Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("AnnotationFilter")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("AnnotationFilter")

HTML	R Script	Facilities for Filtering Bioconductor Annotation resources
PDF		Reference Manual
Text		README
Text		NEWS

Details

biocViews	Annotation,Infrastructure,Software
Version	1.12.0
In Bioconductor since	BioC 3.5 (R-3.4) (3.5 years)
License	Artistic-2.0
Depends	R (>= 3.4.0)
Imports	utils, methods,GenomicRanges,lazyeval
LinkingTo
Suggests	BiocStyle,knitr,testthat,RSQLite,org.Hs.eg.db
SystemRequirements
Enhances
URL	https://github.com/Bioconductor/AnnotationFilter
BugReports	https://github.com/Bioconductor/AnnotationFilter/issues
Depends On Me	chimeraviz,ensembldb,Organism.dplyr
Imports Me	biovizBase,BUSpaRse,ggbio,TVTB
Suggests Me	TFutils,TxRegInfra,wiggleplotr
Links To Me
Build Report

Package Archives

Followbob 体育网址 instructions to use this package in your R session.

Source Package	AnnotationFilter_1.12.0.tar.gz
Windows Binary	AnnotationFilter_1.12.0.zip
macOS 10.13 (High Sierra)	AnnotationFilter_1.12.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/AnnotationFilter
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/AnnotationFilter
Package Short Url	//www.anjoumacpherson.com/packages/AnnotationFilter/
Package Downloads Report	Download Stats