# # # R代码从装饰图案的tRanslatome_package来源。Rnw的utf - 8编码:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块1号:tRanslatome_package。Rnw: 55 - 75 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #加载tRanslatome包库(tRanslatome) # #加载(tRanslatomeSampleData) tRanslatome训练数据集数据。分析< - newTranslatomeDataset (expressionMatrix, c (“tot.undiff。”、“tot.undiff。b”、“tot.undiff.c”), c (“tot.diff。”、“tot.diff。b”、“tot.diff.c”), c (“pol.undiff。”、“pol.undiff。b”、“pol.undiff.c”), c (“pol.diff。”、“pol.diff。b”、“pol.diff.c”),标签。水平= c(“转录组”、“translatome”),标签。条件= c(“无差别”,“差异化”))# #的识别度与limma limma统计方法的使用。度< - computeDEGs (translatome。分析、方法=“limma”mult.cor = TRUE) # #浓缩的分析选择度CCEnrichment < - GOEnrichment (limma。度,本体=“CC”, classOfDEGs =“向上”,测试。=“琳”方法,测试。threshold = 0.05) ##performing a comparison of the biological themes enriched ##in the two levels of gene expression CCComparison <- GOComparison(CCEnrichment)