# # - - - - -设置,包括= FALSE - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - knitr:: opts_chunk设置美元(崩溃= TRUE,评论= " # >”)# # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -库(SMAD)数据(“TestDatInput”)头(TestDatInput) # #——回声= TRUE,消息= FALSE,警告= FALSE - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - scoreCompPASS <——CompPASS (TestDatInput)头(scoreCompPASS) # #——CompPASS输出图,呼应= FALSE, fig.height = 7, fig.width = 7,消息= FALSE,警告= FALSE,分页。打印= FALSE——par (mfrow = c(2, 2))情节(排序(scoreCompPASS scoreZ美元,减少= TRUE), pch = 16, xlab =“排名bait-prey互动”,ylab =“z分数”)情节(排序(scoreCompPASS几十美元,减少= TRUE), pch = 16, xlab =“排名bait-prey互动”,ylab =“S-score”)情节(排序(scoreCompPASS打进美元,减少= TRUE), pch = 16, xlab =“排名bait-prey互动”,ylab =“差异分数”)情节(排序(scoreCompPASS scoreWD美元,减少= TRUE), pch = 16, xlab =“排名bait-prey互动”,ylab =“WD-score”) # # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - scoreHG < - HG (TestDatInput)头(scoreHG) # # - - - - - HG输出图,呼应= FALSE, fig.height = 7, fig.width = 7,消息= FALSE,警告= FALSE,分页。打印= FALSE——情节(排序(scoreHG HG美元,减少= TRUE), pch = 16, xlab =“排名prey-prey互动”,ylab =“HGscore”)