更改版本1.9 o Bumphunter的Bootstrap方法中修复了错误。计算推理的系数始终为2，而不是作为参数传递的系数COEF。版本1.3 o固定名称空间问题的更改。o最近的（）现在将tt.rda加载到本地环境中o nown_transcripts（），因此matchgenes（）主要屈服于refSeq /'注释'列（如果有多个RefSeq ID，则给定的Entrez / Gene ID有多个RefSeq ID）o固定数据/tt.rda，为已知_transcripts（）的新值。o清理新闻。o将github URL添加到描述中。o清理重复项建议：。版本1.1 o的更改添加了新闻文件。o修复了与> =数字有关的错误。o使用函数LocFitByCluster在LocFit软件包中实现的高斯内核添加了平滑度。 o Added closeSockets for cleanup for doParallel on Windows. o More bugfixes for windows; now using foreachCleanup(). o Added a 'bumps' class and print method. o annotateNearest / regionMatch now give NA annotations for queries with no nearest subject (perhaps because the seqname is missing from the subject). Previously this was taken to be mistaken input and a hard error raised. o Speedup of fwer computations using foreach. o Added boundedClusterMaker. o bug fix to internal function .getModT (which are not used in the main bumphunter functions). Now the t-statistics returned a correct.