版本3.2.2 ---------------------------------------------------------------------------------新功能o更新引用3.2.1 ------------------------------------新功能o添加3.0.1版中的一个引用更改------------------------------------------------------错误修复o o当addgeneids的输入不正确时给出错误。CHANGES IN VERSION 3.0.0 ------------------------- NEW FEATURE o From RangedData to Granges o High efficiency o Find Overlaps for more than 2 groups o添加实用程序测试o添加新功能BinoverFeature，Egorgmap。版本2.17.2的更改----------------------------------新功能o添加Bybase for Makevendiagram。版本2.11.4 -----------------------------------------------新功能o在AnnotatePeakinBatch的输出参数中添加“简短速度”的选择。版本2.12.3的更改-----------------------------错误修复o负链的相对邮局在呼叫condoverlappappingpeaks时不正确。版本2.11.4 -----------------------------------------------新功能o在AnnotatePeakinBatch的输出参数中添加“简短速度”的选择。版本2.11.3 ----------------------------------------------新功能o提高AntatePeakinBatch的效率。CHANGES IN VERSION 2.9.6 ------------------------ BUG FIXES o Changed Enhancer.Silencer to intergenic.Region in assignChromosomeRegion.版本2.9.5 ---------------------------------------错误修复o呼叫condoverlappingpeaks时不允许负宽度。 NEW FEATURES IN VERSION 2.2.0 ------------------------ o Find the peaks with bi-directional promoters with summary statistics (peaksNearBDP). o Summarize the occurrence of motifs in peaks (summarizePatternInPeaks). o Add other IDs to annotated peaks or enrichedGO (addGeneIDs)The function makeVennDiagram supports 4-way venn diagram. o Enriched Gene Ontology (GO) terms are annotated with a list of genes which can be traced back to peaks. o FAQ: http://pgfe.umassmed.edu/ChIPpeakAnno/FAQ.html. o Summarize peak distribution over exon, intron, enhancer, proximal promoter, 5 prime UTR and 3 prime UTR (assignChromosomeRegion)