# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块1号:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #库(XhybCasneuf) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块2号:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # (AffysTissue)数据探针组对所有数据(CustomsTissue) # #探针组对基因相互不一致与爆炸创造价值小于10美元^ {-10}$ data (AffysTissue.noBl)数据(CustomsTissue.noBl) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块3号:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # myXs < - c (seq(55, 70,长度。= 3),seq(75125,长度= 5))tiltedmyboxF < -函数(X, Y,主要){par (mar = c(7、4、4、2) + 0.1)箱线图(Y ~ X,坳=“skyblue2 ylim = c (1, 1), ylab =表达式(ρ(xy)), varwidth = T, xaxt =“n”, cex。主要实验室= 1.4,=主要xlab = " ")轴(1、标签= FALSE)文本(seq_len (nlevels (X)),票面(“usr”) [3] - 0.15, srt = 45岁的n = 1,标签(X) =水平,xpd = TRUE)文本(4,票面价值(“usr”) [3] - 0.6, adj = 1,标签=表达式(Q (xy) ^ 75), xpd = TRUE) abline (0, 0, lty = 2)} # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块数量4:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # X11(高度= 10,宽度= 10)布局(矩阵(1:4,nrow = 2, byrow = F)) #所有成对的风俗和affymetrix CDF tiltedmyboxF(削减(myXs AffysTissue alSum美元,包括。最低= TRUE,右= TRUE), AffysTissue peCC美元,主要=“A”) tiltedmyboxF(削减(myXs CustomsTissue alSum美元,包括。最低= TRUE,右= TRUE), CustomsTissue peCC美元,主要=“B”) #排除基因对爆炸了价值< 10 ^ -10 tiltedmyboxF(削减(AffysTissue。myXs noBl alSum美元,包括。最低= TRUE,右= TRUE), AffysTissue。peCC noBl美元,主要=“C”) tiltedmyboxF(削减(CustomsTissue。myXs noBl alSum美元,包括。最低= TRUE,右= TRUE), CustomsTissue。peCC noBl美元,主要=“D”) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块5号:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # (AffysTissueMC)数据(CustomsTissueMC) myboxplot < -函数(X, Y,主要){箱线图(Y ~ X,坳=“skyblue2”, ylim = c (1, 1), ylab =表达式(软木(ρ[X[我]* Y] *[我])),varwidth = T, xaxt =“n”, cex。主要实验室= 1.4,=主要xlab =表达式(Q (xy) ^ 75))轴(1、标签= FALSE)文本(seq_len (nlevels (X)) + 0.25,票面价值(“usr”) [3] - 0.12, srt = 20, adj = 1,标签(X) =水平,xpd = TRUE) abline (0, 0, lty = 2)} par (mfrow = c(1、2) #所有成对的Affymetrix CDF X < -削减(myXs AffysTissueMC alSum美元,包括。最低= TRUE,右= TRUE) myboxplot (X, AffysTissueMC泥浆校正美元,主要=“A”) #所有成对的定制的CDF X < -削减(myXs CustomsTissueMC alSum美元,包括。最低= TRUE,右= TRUE) myboxplot (X, CustomsTissueMC泥浆校正美元,主要=“B”) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块6号:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #数据(例1)plotExample(例1)# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块7号:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #数据(ex2) plotExample (ex2) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块8号:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #数据(要是)plotExample(要是)# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块9号:# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # runSimulation ()