affy

Affymetrix寡核苷酸阵列方法

该软件包包含用于探索性寡核苷酸阵列分析的功能。对tkWidgets的依赖只涉及少数方便函数。'affy'没有它也是完全有用的。

作者 Rafael A. Irizarry, Laurent Gautier, Benjamin Milo Bolstad和Crispin Miller, Magnus Astrand, Leslie M. Cope, Robert Gentleman, Jeff Gentry, Conrad Halling, Wolfgang Huber, James MacDonald, Benjamin i.p. Rubinstein, Christopher Workman, John Zhang的贡献
维护人员 拉斐尔·a·伊瑞扎里

要安装这个包,启动R并输入:

源(“//www.anjoumacpherson.com/biocLite.R”)biocLite(“affy”)

小插曲(文档)

包下载

affy.pdf
builtinMethods.pdf
customMethods.pdf
dealing_with_cdfenvs.pdf
vim.pdf
affy_1.18.2.tar.gz
Windows二进制 affy_1.18.2.zip
OS X二进制文件 affy_1.18.2.tgz

细节

biocViews
取决于 R, Biobase, methods, utils, affyio, preprocessCore
建议 tkWidgets, affydata, geneplotter
进口
SystemRequirements
许可证 LGPL (>= 2.0)
URL
dependsOnMe AffyExpress, GeneTraffic, Harshlight, RefPlus, adSplit, affyPLM, affyPara, affyQCReport, affycoretools, affylmGUI, affypdnn, altcdfenvs, beadarray, bgx, ecolitk, exonmap, factDesign, gcrma, lumi, maDB, makecdfenv, matchprobes, panp, plier, plw, puma, rHVDM, simpleaffy, sscore, tilingArray, vsn, webbioc
suggestsMe bicacles, BufferedMatrixMethods, beadarraySNP, hexbin, limma, made4, oneChannelGUI, siggenes