##尝试http：//如果不支持https：// url source（“https://biocumon.org/bioclite.r”）Bioclite（“AnnotationDbi”）

此套餐适用于Biocumonders 2.10版;对于稳定的最新版本版本，请参阅annotationdbi.。

注释数据库界面

生物导体版本：2.10

提供使用SQLite数据存储的注释数据包的用户界面和数据库连接代码。

作者：Herve页面，Marc Carlson，Seth Falcon，Nianhua Li

维护者：Bioconductor Package维护者

安装

要安装此包，请启动R并输入：

##尝试http：//如果不支持https：// url source（“https://biocumon.org/bioclite.r”）Bioclite（“AnnotationDbi”）

文件

要查看系统中安装此包版本的文档，请启动r并输入：

BROWSEVIGNETTES（“AnnotationDBI”）

PDF.		AnnotationDBI：如何使用来自“.db”注释包的Bimaps
PDF.		使用新数据库架构创建注释包
PDF.		创建探针包
PDF.		databaseTypes.pdf.pdf.pdf.
PDF.		Biocuctor Innotation Packages简介
PDF.		sqlforge：一种使用标准数据库模式创建新的注释包的简单方法。
PDF.		参考手册
文本		消息

细节

Biocviews.	注解那基础设施那软件
版本	1.18.4
在生物导体中以来	BIOC 2.1（R-2.6）（8.5岁）
执照	艺术-2.0
依靠	R（> = 2.7.0），方法，UTI，生物根系（> = 0.1.13），BioBase.（> = 1.17.0）
进口	方法，Utils，DBI.那rsqlite.那生物根系那BioBase.那绞喉
链接到
建议	DBI.（> = 0.2-4），rsqlite.（> = 0.6-4），hgu95av2.db.那go.db.那Human.db0.那hgu95av2cdf.那org.sc.sgd.db.那org.at.tair.db.那敬服那kegg.db.那XML.那rcurl.那运行那txdb.hsapiens.ucsc.hg19.knowngene.那hom.hs.inp.db.那org.hs.eg.db.
系统要求
加强
URL.
取决于我	A4Base.那a4preproc.那Adme16cod.db.那ag.db.那agcdf.那agprobe.那注释那annotationfuncs.那anopheles.db0.那rabidopsis.db0.那ATH1121501.DB.那ATH1121501CDF.那ATH1121501Probe.那吸引那巴利1CDF.那Barley1probe.那Bovine.DB.那Bovine.db0.那Bovinecdf.那BovineProbe.那bsubtiriscdf.那bsubtilisprobe.那canine.db.那Canine.db0.那canine2.db.那Canine2CDF.那canine2probe那Caninecdf.那CanineProbe.那类别那CompoundationCompare.那celegans.db.那celeganscdf.那celegansprobe.那Chicken.DB.那Chicken.db0.那chickencdf.那鸡工厂那黑猩猩.DB0.那ChromheatMap.那Citruscdf.那Citrusprobe.那Cottoncdf.那棉花工程那CYP450CDF.那do.db.那drosgenome1.db.那Drosgenome1CDF.那drosgenome1probe.那果蝇2.db.那德罗咽那果蝇那Ecoli2.db.那Ecoli2CDF.那Ecoli2probe.那Ecoliasv2CDF.那Ecoliasv2probe.那ecolicdf.那Ecolik12.db0.那ecoliprobe.那Ecolisakai.db0.那艾莎那fly.db0.那gahgu133a.db.那gahgu133aprobe.那gahgu133b.db.那gahgu133bprobe.那gahgu133plus2.db.那gahgu133plus2probe.那gahgu95av2.db.那gahgu95av2probe.那gahgu95b.db.那gahgu95bprobe.那gahgu95c.db.那gahgu95cprobe.那gahgu95d.db.那gahgu95dprobe.那gahgu95e.db.那gahgu95eprobe.那Gene2Pathway.那基因组法那ggdata.那gghumanmethcancerpanelv1.db.那go.db.那凑功能那Goprofiles.那GP53CDF.那h10kcod.db.那H20KCOD.DB.那hcg110.db.那HCG110CDF.那HCG110Probe.那hgfocus.db.那hgfocuscdf.那hgfocusprobe.那hgu133a.db.那hgu133a2.db.那hgu133a2cdf.那hgu133a2probe.那hgu133acdf.那hgu133aprobe.那hgu133atagcdf.那hgu133atagprobe.那hgu133b.db.那hgu133bcdf.那hgu133bprobe.那hgu133plus2.db.那hgu133plus2cdf.那hgu133plus2probe.那hgu219.db.那hgu219cdf.那hgu219probe.那hgu95a.db.那hgu95acdf.那hgu95aprobe.那hgu95av2.db.那hgu95av2cdf.那hgu95av2probe.那hgu95b.db.那hgu95bcdf.那hgu95bprobe.那hgu95c.db.那hgu95ccdf.那hgu95cprobe.那hgu95d.db.那hgu95dcdf.那hgu95dprobe.那hgu95e.db.那hgu95ecdf.那hgu95eprobe.那hguatlas13k.db.那hgubeta7.db.那hgudkfz31.db.那hgug4100a.db.那hgug4101a.db.那hgug4110b.db.那hgug4111a.db.那hgug4112a.db.那hgug4845a.db.那Hguqiagenv3.db.那hi16cod.db.那HIVPRTPLUS2CDF.那hom.at.inp.db.那hom.ce.inp.db.那hom.dm.inp.db.那hom.dr.inp.db.那hom.hs.inp.db.那hom.mm.inp.db.那hom.rn.inp.db.那hom.sc.inp.db.那hs25kresogen.db.那hs6ug171.db.那hsagilentdesign026652.db.那hthgu133a.db.那hthgu133acdf.那hthgu133aprobe.那hthgu133b.db.那hthgu133bcdf.那hthgu133bprobe.那hthgu133pluspmcdf.那hthgu133pluspmprobe.那htmg430acdf.那htmg430aprobe.那htmg430bcdf.那htmg430bprobe.那htmg430pmcdf.那htmg430pmprobe.那HTRAT230PMCDF.那HTRAT230PMPROBE.那htratfocuscdf.那htratfocusprobe.那hu35ksuba.db.那hu35ksubacdf.那hu35ksubaprobe.那hu35ksubb.db.那hu35ksubbcdf.那hu35ksubbprobe.那hu35ksubc.db.那hu35ksubccdf.那hu35ksubcprobe.那hu35ksubd.db.那hu35ksubdcdf.那hu35ksubdprobe那hu6800.db.那HU6800CDF.那hu6800probe.那hu6800subacdf.那hu6800subbcdf.那hu6800subccdf.那hu6800subdcdf.那huexexonprobesetlocation.那huexexonprobesetlocatehg18.那huexexonprobesetlocatehg19.那hugene10stprobeset.db.那hugene10sttranscriptcluster.db.那Hugene10stv1cdf.那Hugene10Stv1probe.那hugene11stprobeset.db.那hugene11sttranscriptcluster.db.那Human.db0.那HUO22.DB.那hwgcod.db.那Illuminahumanmethylation27k.db.那illuminahumanmethylation450k.db.那illuminahumanmethylation450kprobe.那illiminahumanv1.db.那illiminahumanv2.db.那illuminahumanv2beadid.db.那illuminahumanv3.db.那illiminahumanv4.db.那illuminahumanwgdaslv3.db.那illuminahumanwgdaslv4.db.那Illuminamousev1.db.那Illuminamousev1p1p1.db.那Illuminamousev2.db.那Illuminaratv1.db.那Indac.DB.那jazaerimetadata.db.那kegg.db.那lapointe.db.那lumihumanall.db.那lumihumanidmappping那lumimouseall.db.那lumimouseidmappping那lumiratall.db.那lumiratidmapping那m10kcod.db.那m20kcod.db.那Maizecdf.那MaizeProbe.那malaria.db0.那MedicaCocdf.那Medicogopobe.那mgu74a.db.那mgu74acdf.那mgu74aprobe.那mgu74av2.db.那mgu74av2cdf.那mgu74av2probe.那mgu74b.db.那mgu74bcdf.那mgu74bprobe.那mgu74bv2.db.那mgu74bv2cdf.那mgu74bv2probe.那mgu74c.db.那mgu74ccdf.那mgu74cprobe.那mgu74cv2.db.那mgu74cv2cdf.那mgu74cv2probe.那mguatlas5k.db.那mgug4104a.db.那mgug4120a.db.那mgug4121a.db.那mgug4122a.db.那mi16cod.db.那mirbase.db.那miRNA102xgainCDF.那miRNA10CDF.那miRNA10probe.那miRNA20CDF.那MLP.那mm24kresogen.db.那mmagilentdesign026655.db.那moe430a.db.那moe430acdf.那moe430aprobe.那moe430b.db.那moe430bcdf.那moe430bprobe.那moexexonprobesetlocation.那mogene10stprobeset.db.那mogene10sttranscriptcluster.db.那mogene10stv1cdf.那mogene10stv1probe.那mogene11stprobeset.db.那mogene11sttranscriptcluster.db.那mouse.db0.那mouse4302.db.那mouse4302cdf.那鼠标4302probe.那mouse430a2.db.那mouse430a2cdf.那mouse430a2probe.那mpedbarray.db.那mu11ksuba.db.那mu11ksubacdf.那mu11ksubaprobe.那mu11ksubb.db.那mu11ksubbcdf.那mu11ksubbprobe.那mu15v1.db.那mu19ksuba.db.那mu19ksubacdf.那mu19ksubb.db.那mu19ksubbcdf.那mu19ksubc.db.那mu19ksubccdf.那mu22v3.db.那mu6500subacdf.那mu6500subbcdf.那mu6500subccdf.那mu6500subdcdf.那mwgcod.db.那挪威981.db.那nugohs1a520180.db.那nugohs1a520180cdf.那nugohs1a520180probe.那nugomm1a520177.db.那nugomm1a520177cdf.那nugomm1a520177probe.那operonhumanv3.db.那org.ag.eg.db.那org.at.tair.db.那org.bt.eg.db.那org.ce.eg.db.那org.cf.eg.db.那org.dm.eg.db.那org.dr.eg.db.那org.eck12.eg.db.那org.ecsakai.eg.db.那org.gg.eg.db.那org.hs.eg.db.那org.hs.ipi.db.那org.mm.eg.db.那org.mmu.eg.db.那org.pf.plasmo.db.那org.pt.eg.db.那org.rn.eg.db.那org.sc.sgd.db.那org.sco.eg.db.那org.ss.eg.db.那org.tgondii.eg.db.那org.xl.eg.db.那Paeg1acdf.那Paeg1aprobe.那PannBuilder.那partheenmetadata.db.那途径那pedbarrayv10.db.那pedbarrayv9.db.那pfam.db.那PGSEA那PIG.DB0.那plasmodiumanophelescdf.那Plasmodiumanophelesprobe.那pocrcannotation.db.那poplarcdf.那Poplarprobe.那porcine.db.那porcinecdf.那PorcineProbe.那primeviewcdf.那primeviewprobe.那r10kcod.db.那Rae230a.db.那rae230acdf.那Rae230aprobe.那Rae230b.db.那rae230bcdf.那rae230bprobe.那RaexexonProbesetLocation.那ragene10stprobeset.db.那ragene10sttranscriptcluster.db.那ragene10stv1cdf.那Ragene10stv1probe.那ragene11stprobeset.db.那ragene11sttranscriptcluster.db.那rat.db0.那rat2302.db.那rat2302cdf.那rat2302probe.那rattoxfxcdf.那rattoxfxprobe.那反弹.DB.那救济服务器那rgu34a.db.那rgu34acdf.那Rgu34aprobe.那rgu34b.db.那RGU34BCDF.那RGU34BPROBE.那rgu34c.db.那rgu34ccdf.那RGU34CPROBE.那Rguatlas4k.db.那rgug4105a.db.那rgug4130a.db.那rgug4131a.db.那rhesuus.db0.那rhesuscdf.那rhehusprobe.那RI16COD.DB.那RICECDF.那大米那rnagilentdesign028282.db.那rnu34.db.那RNU34CDF.那rnu34probe.那Roberts2005Annotation.db.那rpsixml.那RTU34.DB.那RTU34CDF.那RTU34Probe.那rwgcod.db.那鼬那萨鲁斯百货那shdz.db.那大豆那豆百倍那Sugarcanecdf.那SugarcaneProbe.那targetscan.hs.eg.db.那targetscan.mm.eg.db.那test1cdf.那test2cdf.那test3cdf.那test3probe.那tinesath1probe.那Tomatocdf.那Tomatopobe.那顶点那U133AAOFAV2CDF.那U133x3p.db.那U133X3PCDF.那U133x3pprobe.那vitisviniferacdf.那vitisviniferaprobe.那Wheatcdf.那Wheatprobe.那WORM.DB0.那Xenopus.db0.那Xenopuslaeviscdf.那Xenopuslaevisprobe.那xlaevis.db.那xlaevis2cdf.那xlaevis2probe.那XTropicalIscdf.那Xtropicalisprobe.那ye6100subacdf.那ye6100subbcdf.那ye6100subccdf.那ye6100subdcdf.那yeast.db0.那yeast2.db.那yeast2cdf.那yeast2probe.那YGS98.DB.那YGS98CDF.那YGS98Probe.那Zebrafish.DB.那Zebrafish.db0.那Zebrafishcdf.那Zebrafishprobe.
进口我	Adme16cod.db.那adsplit.那倍感工具那ag.db.那andaffy.那注释那anopheles.db0.那rabidopsis.db0.那ATH1121501.DB.那吸引那Beadarray那二乙衫那Bovine.DB.那Bovine.db0.那癌变分析那canine.db.那Canine.db0.那canine2.db.那类别那CompoundationCompare.那celegans.db.那张2010那Chicken.DB.那Chicken.db0.那黑猩猩.DB0.那Chippeakanno.那ChromheatMap.那ClusterProfiler.那椰子那do.db.那蒙多尼亚人那剂量那drosgenome1.db.那果蝇2.db.那Ecoli2.db.那Ecolik12.db0.那Ecolisakai.db0.那表达式那fdb.ucsc.trnas.那fly.db0.那gahgu133a.db.那gahgu133b.db.那gahgu133plus2.db.那gahgu95av2.db.那gahgu95b.db.那gahgu95c.db.那gahgu95d.db.那gahgu95e.db.那Genefilter.那Genegrounalysis.那Geneplotter.那GGBase.那gghumanmethcancerpanelv1.db.那GGTools.那Globalancova那全球化境那go.db.那凑功能那Gosemsim.那Goseq.那古司裤那gools那石墨那GSEABASE.那GVIZ.那h10kcod.db.那H20KCOD.DB.那hcg110.db.那hgfocus.db.那hgu133a.db.那hgu133a2.db.那hgu133b.db.那hgu133plus2.db.那hgu219.db.那hgu95a.db.那hgu95av2.db.那hgu95b.db.那hgu95c.db.那hgu95d.db.那hgu95e.db.那hguatlas13k.db.那hgubeta7.db.那hgudkfz31.db.那hgug4100a.db.那hgug4101a.db.那hgug4110b.db.那hgug4111a.db.那hgug4112a.db.那hgug4845a.db.那Hguqiagenv3.db.那hi16cod.db.那hom.at.inp.db.那hom.ce.inp.db.那hom.dm.inp.db.那hom.dr.inp.db.那hom.hs.inp.db.那hom.mm.inp.db.那hom.rn.inp.db.那hom.sc.inp.db.那hs25kresogen.db.那hs6ug171.db.那hsagilentdesign026652.db.那hthgu133a.db.那hthgu133b.db.那Htsanalyzer.那hu35ksuba.db.那hu35ksubb.db.那hu35ksubc.db.那hu35ksubd.db.那hu6800.db.那hugene10stprobeset.db.那hugene10sttranscriptcluster.db.那hugene11stprobeset.db.那hugene11sttranscriptcluster.db.那Human.db0.那HUO22.DB.那hwgcod.db.那Illuminahumanmethylation27k.db.那illuminahumanmethylation450k.db.那illiminahumanv1.db.那illiminahumanv2.db.那illuminahumanv2beadid.db.那illuminahumanv3.db.那illiminahumanv4.db.那illuminahumanwgdaslv3.db.那illuminahumanwgdaslv4.db.那Illuminamousev1.db.那Illuminamousev1p1p1.db.那Illuminamousev2.db.那Illuminaratv1.db.那Indac.DB.那jazaerimetadata.db.那kegg.db.那Kogcorthology.那lapointe.db.那lumi.那lumihumanall.db.那lumihumanidmappping那lumimouseall.db.那lumimouseidmappping那lumiratall.db.那lumiratidmapping那m10kcod.db.那m20kcod.db.那malaria.db0.那弥撒那mgu74a.db.那mgu74av2.db.那mgu74b.db.那mgu74bv2.db.那mgu74c.db.那mgu74cv2.db.那mguatlas5k.db.那mgug4104a.db.那mgug4120a.db.那mgug4121a.db.那mgug4122a.db.那mi16cod.db.那mirbase.db.那mm24kresogen.db.那mmagilentdesign026655.db.那moe430a.db.那moe430b.db.那mogene10stprobeset.db.那mogene10sttranscriptcluster.db.那mogene11stprobeset.db.那mogene11sttranscriptcluster.db.那mouse.db0.那mouse4302.db.那mouse430a2.db.那mpedbarray.db.那mu11ksuba.db.那mu11ksubb.db.那mu15v1.db.那mu19ksuba.db.那mu19ksubb.db.那mu19ksubc.db.那mu22v3.db.那mwgcod.db.那挪威981.db.那nugohs1a520180.db.那nugomm1a520177.db.那operonhumanv3.db.那org.ag.eg.db.那org.at.tair.db.那org.bt.eg.db.那org.ce.eg.db.那org.cf.eg.db.那org.dm.eg.db.那org.dr.eg.db.那org.eck12.eg.db.那org.ecsakai.eg.db.那org.gg.eg.db.那org.hs.eg.db.那org.hs.ipi.db.那org.mm.eg.db.那org.mmu.eg.db.那org.pf.plasmo.db.那org.pt.eg.db.那org.rn.eg.db.那org.sc.sgd.db.那org.sco.eg.db.那org.ss.eg.db.那org.tgondii.eg.db.那org.xl.eg.db.那PannBuilder.那partheenmetadata.db.那患者那PCAGOPRomoter.那PCHENO.那pedbarrayv10.db.那pedbarrayv9.db.那pfam.db.那现象那PIG.DB0.那pocrcannotation.db.那polyphen.hsapiens.dbsnp131那porcine.db.那QPGraph..那r10kcod.db.那Rae230a.db.那Rae230b.db.那ragene10stprobeset.db.那ragene10sttranscriptcluster.db.那ragene11stprobeset.db.那ragene11sttranscriptcluster.db.那rat.db0.那rat2302.db.那反弹.DB.那反弹那Redseq.那rgu34a.db.那rgu34b.db.那rgu34c.db.那Rguatlas4k.db.那rgug4105a.db.那rgug4130a.db.那rgug4131a.db.那rhesuus.db0.那RI16COD.DB.那rmir​​.hs.mirna那rmir​​.hsa.那rnagilentdesign028282.db.那rnu34.db.那Roberts2005Annotation.db.那RTU34.DB.那rwgcod.db.那安全的那scisi.那shdz.db.那sift.hsapiens.dbsnp132那SLGI.那targetscan.hs.eg.db.那targetscan.mm.eg.db.那蒂格雷那顶点那txdb.athalana.biomart.plantsmart10.那txdb.athalana.biomart.plantsmart12.那txdb.celegans.ucsc.CE6.ensgene.那txdb.dmelanogaster.ucsc.dm3.ensgene.ensgene.那txdb.hsapiens.ucsc.hg18.knowngene.那txdb.hsapiens.ucsc.hg19.knowngene.那txdb.hsapiens.ucsc.hg19.lincrnastranscripts.那txdb.mmusculus.ucsc.mm10.ensgene.那txdb.mmusculus.ucsc.mm9.knowngene.那txdb.rnorvegicus.ucsc.rn4.ensgene.那txdb.scerevisiae.ucsc.saccer2.sgden.那U133x3p.db.那VariantAnnotation.那虚拟array那WORM.DB0.那Xenopus.db0.那xlaevis.db.那yeast.db0.那yeast2.db.那YGS98.DB.那Zebrafish.DB.那Zebrafish.db0.
建议我	Bioccasestudies.那生物根系那表达式那Geneanswers.那Generegionscan.那mmpalatemirna.那onechannelgui.那SigPathway.
建立报告

包档案包

跟随bob 体育网址 在r会话中使用此包的说明。

包来源	annotationdbi_1.18.4.tar.gz.
Windows二进制文件	annotationdbi_1.18.4.zip.
Mac OS x 10.6（雪豹）
subversion源	（用户名/密码：ReadOnly）
git源	https://github.com/biocumon-mirror/annotationdbi/tree/release-2.10
包短网址	http://biocidodder.org/packages/annotationdbi/
包裹下载报告	下载统计信息